Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK1725 |
Symbol | topB |
ID | 3024951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 1846343 |
End bp | 1848487 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637545954 |
Product | DNA topoisomerase III |
Protein accession | YP_083320 |
Protein GI | 52143516 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0147593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA TTATTGCCGA GAAACCAGAT CAAGGTTTGG CTCTTGTTTC ACAGTTTAAA TATCGCCGGA AAGATGGATA TTTAGAAGTA GAAGCGAATG AGTTATTTCC AAGTGGAGCG TACTGTACAT GGGCAATTGG TCATTTGACG CAGTTATGTA ATCCAGAACA TTATCACGCA GAGTGGAAAA AATGGTCACT TGATACGTTA CCGATGATTC CTGAACGATT TCAATTTGAA GTAACAAAGT CGAAGTATAA ACAATTTAAC GTTGTGAAAC AGCTGTTACA TAATCCTCAG GTAACAGAAA TTATTCATGC GGGCGATGCT GGGCGTGAAG GGGAATTGAT TGTACGAAAT ATTATTAACC TTTGCAACGT GCAAAAGCCG ATGAAACGTC TTTGGATTTC ATCTTTAACG AAACAAGCTA TTTATCAAGG CTTTAAAAAC TTACTCGATG AATCAGATAC AATCAATACG TACTATGAGG CGTATACAAG GTCGTGTGCG GACTGGGTCG TTGGGATGAA TGCATCGCGT GTGTTTAGTA TTTTGCTAAA GAAAAAAGGA ATGAACGATG TATTTTCAGC TGGTCGTGTA CAAACACCGA CACTCGCGTT AATCGTAAAG CGTGAGAAAG AAATTGAAAA CTTTAAGTCA GAGCCGTTTT GGGAAGTGTT CGCAACCTTT AATATAGAAG GAAAGAAATA TGATGGGAAA TGGGAAAAGG ATAATGAATC CCGCTTACAA GACCCTGATA TGGCAAATAA AATTGCGGCA TTTTGCCAAG GAAAACCGGC GGTAGTAAAG GAAATGAAAA CGGAGCGTAA AGAGTTTCAG CCTCCGCTTT TATTTAACTT ATCATCACTA CAAGCAACGG CAAATAAAGC ATTTAAATTT TCACCGAAAA AGACGCTTGA TATAACGCAA GCACTATATC AAAAAGGAAT TGTCTCTTAT CCTCGTTCAG ATTCCAACTA TGTTACACAA GGTGAAGCGG CAACATTCCC TGATATTTTA CAGAAGTTAA GTCAGTTTGA TGAATATAAA GGTTTATTAC CAGCTCCGGT TGAATCGATT ATGAATAATA AGCGTTATGT GAATGAAAAG AAAGTAACGG ATCACTACGC CATTATTCCG ACAGAGCAAG TTACAAATCC AAGCAGACTA TCAGGTGATG AAAAGAAAAT TTACGATATG ATCGTAAGAA GGCTTATTGC AGCTCACTAT GAAGTTGCAA TCTTTGACTA TACAACGATT GTAACGCTTG TAGATGAACG TGCTGAATTC ATTTCAAAAG GAAAACAGCA AATTCAAGAA GGATGGCGTA AAGTTATTTT CCAAGACGAT AAAGATGATG AAACCATTCT TCCAATTGTA GCTGAAGGTG AAGAAGGAAA AGTTGTAAAG GTGAAAGTGA AAGAAGGAAA AACACAACCA CCGAAGCGTT ATACAGAAGG ACAACTTATT ACGTTAATGA AAACAGCTGG TAAATATTTA GAGAATGAAG AGCTGGAGAA AGTATTAAAG AAAACAGAAG GTTTAGGTAC AGAAGCAACT CGTGCAGGTA TTATTACGAT GCTAAAAGAC CGTAAATATA TAGATGTGAA AAAAAACCAG GTGTATGCGA CTGATAAAGG AAAAGTATTA ATTACCGCAA TCGGTGACAA AATACTAGCT TCACCAGAAA TGACCGCAAA ATGGGAGCAA CGTCTTGCGG AAATTGGGGA AGGTACAGCA TCACCGGCAA CTTTTATGGA ACAAACGAAA AAATTATCAG CTAAAATTAT TGAAGATGCG GTTGAAATGT CTGAGAAGTG GGATTTCACC GGATTACATG TTGAATCGAT TGAGCGAAAA GGATCGAAAT TTACAACGGG TAAAAAGGTT GGTAGCTGTA AAAAATGTGA TGGCGATGTA ATTGATAAGT CAACGTTTTA CGGCTGTTCT AATTACAACA CGACACAATG TGACTTTACC ATTTCGAAGA AGATATTAAG TAAAACAATT TCGCAAAAGA ATATGACAAA GCTCTTAAAA GGTGAAAAGA CGGATTTAAT TAAAGGCTTT AAAAAGGGCG AGAAAACATT TGATGCGAAG TTAGAGTGGA AAGATAATAA GATTAATTTT GTATTTGAGA ATTAA
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Protein sequence | MKLIIAEKPD QGLALVSQFK YRRKDGYLEV EANELFPSGA YCTWAIGHLT QLCNPEHYHA EWKKWSLDTL PMIPERFQFE VTKSKYKQFN VVKQLLHNPQ VTEIIHAGDA GREGELIVRN IINLCNVQKP MKRLWISSLT KQAIYQGFKN LLDESDTINT YYEAYTRSCA DWVVGMNASR VFSILLKKKG MNDVFSAGRV QTPTLALIVK REKEIENFKS EPFWEVFATF NIEGKKYDGK WEKDNESRLQ DPDMANKIAA FCQGKPAVVK EMKTERKEFQ PPLLFNLSSL QATANKAFKF SPKKTLDITQ ALYQKGIVSY PRSDSNYVTQ GEAATFPDIL QKLSQFDEYK GLLPAPVESI MNNKRYVNEK KVTDHYAIIP TEQVTNPSRL SGDEKKIYDM IVRRLIAAHY EVAIFDYTTI VTLVDERAEF ISKGKQQIQE GWRKVIFQDD KDDETILPIV AEGEEGKVVK VKVKEGKTQP PKRYTEGQLI TLMKTAGKYL ENEELEKVLK KTEGLGTEAT RAGIITMLKD RKYIDVKKNQ VYATDKGKVL ITAIGDKILA SPEMTAKWEQ RLAEIGEGTA SPATFMEQTK KLSAKIIEDA VEMSEKWDFT GLHVESIERK GSKFTTGKKV GSCKKCDGDV IDKSTFYGCS NYNTTQCDFT ISKKILSKTI SQKNMTKLLK GEKTDLIKGF KKGEKTFDAK LEWKDNKINF VFEN
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