Gene BCZK1013 details

Gene Information

• Locus tag: BCZK1013
• Symbol: sigM
• ID: 3025187
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus E33L
• Kingdom: Bacteria
• Replicon accession: NC_006274
• Strand: -
• Start bp: 1121834
• End bp: 1122319
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637545247
• Product: RNA polymerase sigma factor
• Protein accession: YP_082614
• Protein GI: 52144214
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02950] RNA polymerase sigma factor, SigM family

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0372577
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAACGTA AACAATCATT AGAAGAAATT TATTCCGAGC ACATGCAAGA TTTATTTCGC 
TACCTTCTCT CCCTAACCGG AGATTGCCAC TATGCGGAAG ATCTCATGCA AGAAACATTT 
TACCGAATGC TCGTCCACAT TGACTATTAT AAAGGAGAAG AAATTAGGCC GTGGTTATTT 
ACAATTGCCT ACAACGCCTT TATCGATTGG TATCGAAAAG AAAAAAGATA TAAAACGACG 
ACAATTACAG AATTCCATTT ACCAAACGTG CCAAGTACAG AACACTCTTA TTTCATAAAA 
CATGAGATTG CTAGTTGGTT AGACAGTTTA TCTTCTCTTC CGCTAGAGAG ACGAAATGTT 
CTGTTACTAC GAGATTACTA CGGATTCTCG TATAAAGAAA TAGCAGAAAT GACCGGTCTC 
TCATTAGCGA AAGTAAAAAT TGAATTACAC CGCGGACGAA AAGAAACGAG AAACATGAAG 
GAGTGA 

 

Protein sequence

MKRKQSLEEI YSEHMQDLFR YLLSLTGDCH YAEDLMQETF YRMLVHIDYY KGEEIRPWLF 
TIAYNAFIDW YRKEKRYKTT TITEFHLPNV PSTEHSYFIK HEIASWLDSL SSLPLERRNV 
LLLRDYYGFS YKEIAEMTGL SLAKVKIELH RGRKETRNMK E