Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0558 |
Symbol | ispH |
ID | 4056281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | + |
Start bp | 587770 |
End bp | 588711 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637981908 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_588987 |
Protein GI | 94676997 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGATTT TGCTTGCTAA CCCACGTGGT TTTTGCGCTG GTGTAGAACG TGCCATTAAC ATTGTTGAAA AAGTTATAGC AATTTATGGT CCGCCAATAT ATGTACGTCA TGAATTAGTC CATAATAGTT ACGTAGTAAA TACACTACGT AATCAAGGTG TCGTATTTAT TGAACAGATA CATGAAGTAC CGGATGGTGC TGTTATTATT TTTTCTGCAC ATGGAGTTTC CAAAGCTATA CGTAAAGAAG TACAAAGCCG TAATCTAACT ATTTTTGATG CTACTTGCCC TCTAGTGACT AAAGTGCATA TGGAAGTTGC ACGCGCAAGC CACAAAGGCA TAGAAACCAT TCTTATTGGC CACTATGGTC ATCCTGAAGT AGAAGGTACG ATAGGACAGT ATAATAATAC GGATGGTGGA ATATATTTAG TAGAGTCGCT AGAAGATGTA TGGCAACTCA AAGTTAAAAA TAAAAATAAT TTATGCTTTA TAACCCAAAC TACTTTTTCT GTAGATAAAA GTTCAGCAAT TATAGATGCA TTACGCCAGC GCTTTCCCTT TATTAAGGGG CCACATAAAC AGGATATTTG CTATGCTACA ACTAATAGGC AAGAAGCAGT ACGTAATTTA ACTATGGCGA CTGATATAGT ACTAGTAGTA GGTTCAAAGA ATTCCTCAAA TTCTAACCGT TTAGTAGAAC TAGCACAGCA AACTGGGAAA CCAGCATATT TAATCGATTG TGCTAGTGAT ATCAAAGAAA ACTGGCTACA GGGAATCAAT ATTATTGGTG TTACTGCTGG TGCATCAGCC CCTAATATTC TTGTCCTACA AGTAATATTA AAGCTGCAAT CTTTTGGTGC AGAAAGCGCT GAAGAGCTAA GAGGATATGA AGAGAAGATG ATATTTGATC TTCCTAGAAA TCTACATGTA GTAAATAAAT AA
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Protein sequence | MRILLANPRG FCAGVERAIN IVEKVIAIYG PPIYVRHELV HNSYVVNTLR NQGVVFIEQI HEVPDGAVII FSAHGVSKAI RKEVQSRNLT IFDATCPLVT KVHMEVARAS HKGIETILIG HYGHPEVEGT IGQYNNTDGG IYLVESLEDV WQLKVKNKNN LCFITQTTFS VDKSSAIIDA LRQRFPFIKG PHKQDICYAT TNRQEAVRNL TMATDIVLVV GSKNSSNSNR LVELAQQTGK PAYLIDCASD IKENWLQGIN IIGVTAGASA PNILVLQVIL KLQSFGAESA EELRGYEEKM IFDLPRNLHV VNK
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