Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0392 |
Symbol | nfo |
ID | 4056197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | - |
Start bp | 404495 |
End bp | 405373 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637981744 |
Product | endonuclease IV |
Protein accession | YP_588835 |
Protein GI | 94677036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.907321 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCAA AAAAGTGGAT TGGTGCACAT GTTAGTATAA ATGGTGGTAT AGATAAAGCT GTTATACGTG CTCATGCATT ACATGCTAAT GCTTTTGCTC TTTTTACCAA AAATCAGCTT CAGTGGAAAG CATCTACACT AACGATTAAT TTAATCAAGA ATTTCCGTGT TGCCTGTAAC AAATATAATT ATACTACAGC ACAAATTTTA CCTCATAATA GCTATCTTAT TAACCTAAGC CATCCAATTA AAGATAAACT AAAACAGTCA AGGATAGCTT TTATTGAAGA ACTACACCGT TGTGAAAAAT TAGGTCTTAG TCTGCTTAAC TTCCATCCAG GTAGTCATTT ACAACAAATA GACGAAGATA ATAGTATTAC TCGTATAGCT GATTCGATTA ATATTGCACT AGAGAAAACT ACAGGCGTTA CAGCCGTAGT TGAAAATACT GCTGGCCAAG GTAGCAATAT GGGTTTTAGG TTTGAACAAC TAGCGGAAAT TATAAGGCAA GTAGATGATA AAAGTCGTAT TGGGGTTTGT ATTGATACCT GTCATGCTTT TGCAGCAGGT TATGATTTAC GTACAGAACA GAGTTGTATT GCTACTTTTA AGCAGTTTGC AGATACTATA GGTTTTAAAT ACCTACGTGG TTTACATTTA AACGATACTA AAACTTCTTG TGGGAGCAGA ATTGATCGCC ACCAAAGCTT GGGTCAAGGT AAAATAGGAT ATACAGCATT TAATTGGATT ATGGCTGATA ACCGTTTCAA TAATATTCCG ATTATTTTAG AAACAATTAA CCCTACTATT TGGTCACAGG AAATAATTTG GCTAAAAAGA ATGGCAACTG CATCAACTAC TACGAATATG GTATTTTAA
|
Protein sequence | MSAKKWIGAH VSINGGIDKA VIRAHALHAN AFALFTKNQL QWKASTLTIN LIKNFRVACN KYNYTTAQIL PHNSYLINLS HPIKDKLKQS RIAFIEELHR CEKLGLSLLN FHPGSHLQQI DEDNSITRIA DSINIALEKT TGVTAVVENT AGQGSNMGFR FEQLAEIIRQ VDDKSRIGVC IDTCHAFAAG YDLRTEQSCI ATFKQFADTI GFKYLRGLHL NDTKTSCGSR IDRHQSLGQG KIGYTAFNWI MADNRFNNIP IILETINPTI WSQEIIWLKR MATASTTTNM VF
|
| |