Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0307 |
Symbol | htpX |
ID | 4056750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | - |
Start bp | 329091 |
End bp | 329966 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637981659 |
Product | heat shock protein HtpX |
Protein accession | YP_588756 |
Protein GI | 94676693 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.173543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCGTA TTGTTATTTT TTTACTTACT AATTTAGCAG TAATGGTAGT TTTTGGTATA TTATTAACCT GTGTAGGTAC CCATTCATCT AATACAGTTA GGTTAATGAT TATCTCTGGA CTATTTGGTT TCTGCGGAGC ATTTATTTCA TTATTAATGT CTAAATTCAT AGCACTACGT TCTGTAGGTG GAAAAGTAAT ATCGCAGCCA CAGAACGAAA CAGAACACTG GTTGCTGAAT ATTATTCTTA ACCAAGCTCA AAAGATAGGA ATAACTATGC CGCAAGTAGC CATTTATAAT GCTCCTGATA TGAATGCTTT TGCTACCGGT CCTAGTCGTA ATAATTCACT AGTAGCAGTT AGTACAGGCT TGTTACAAAA TATGCCTCGT ACTGAAATAG AAGCAGTTAT AGCACATGAA ATAAGTCATA TCTCAAATGG AGATATGGTT ACAATAACCT TGATAAGTGG CATAGTAAAT ACTTTTGTTA TTTTTATATC GCGGTTTTTA GCGCAATTAA CAGCAGGTTT CATCGGATCA AATAATGAAG AAAGTAACAA CGGTAATAAA CTAGTATATA TGATCGTATC AACAATACTA GAATTAGCAT TTGGCATATT AGCTAGTATT ATCGTTTTAT GGTTTTCGCG TTACCGTGAA TTTTACGCAG ATGCAGGTTC AGCTAACATA GTAGGTTGCG ATAAAATGAT CGCTGCACTT CAAAGACTGA AAACAAGTTA CGAACCAAAA GTAACAAATA ATATAAAGAT ATTTTGTATT AATGGATACC AAAAATCATT GAGTGAATTC TTTATGTCTC ACCCACCGCT TAATAAACGT ATTGAAGCAT TACGCTATGG TACTTATATG AAATAA
|
Protein sequence | MMRIVIFLLT NLAVMVVFGI LLTCVGTHSS NTVRLMIISG LFGFCGAFIS LLMSKFIALR SVGGKVISQP QNETEHWLLN IILNQAQKIG ITMPQVAIYN APDMNAFATG PSRNNSLVAV STGLLQNMPR TEIEAVIAHE ISHISNGDMV TITLISGIVN TFVIFISRFL AQLTAGFIGS NNEESNNGNK LVYMIVSTIL ELAFGILASI IVLWFSRYRE FYADAGSANI VGCDKMIAAL QRLKTSYEPK VTNNIKIFCI NGYQKSLSEF FMSHPPLNKR IEALRYGTYM K
|
| |