Gene BCI_0297 details

Gene Information

• Locus tag: BCI_0297
• Symbol: rnb
• ID: 4056277
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: +
• Start bp: 317059
• End bp: 318996
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637981649
• Product: exoribonuclease II
• Protein accession: YP_588746
• Protein GI: 94676993
• COG category: [K] Transcription
• COG ID: [COG4776] Exoribonuclease II
• TIGRFAM ID: [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases; [TIGR02062] exoribonuclease II

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTCAAG ATCACCCACT GCTAATACAG CTCAAACAGC AACTATACGA CAAAGAGCTA 
CGCATGGTAG GTGTAGTTAA AAGCACTGAT AAAGGATTTG GCTTTCTTGA AGTTAACGCA 
CAAAAAAGCT ATTTTATTCC TCCACTTTTT ATGAAAAAAG TAATGCATGG TGATAAAATT 
AGTGCTGTGT TGCGTATTGT AAATAATCGC GCTATTGCTG AACCAGAAAC TTTAATTGAA 
CCTTTTTTAT CTCGTTTTGT TGGTAAGGTG CAAATTAAAA ACGATAAACT AGCACTTTTA 
CCTAAACATC CACTGATTAA AGAAATTATT CCAGCTAGTC AGCCGCGGAG TATGAAGAAT 
ACTCAACTAT GCCATGGAGA CTGGGTCATA GCAGAAATGT GTCACCATCC TTTAGATGGG 
TATCGTTATT TTTATGCTAA AATTACTGAG CTAATTACTA CTAAAGATGA TAATTTTGCC 
CACTGGAGAG TAACTCTTGC TCACTATAAT TTAGAACGTG AAGCACCTGC TATGCCAAAA 
TATCTCACAA TACAAGATAA TGGTTTAATT CGCGAAGATC TAACAGAACT AAACTTTATT 
ACTATTGATC ATGCTAGCAC CGAAGATATA GATGATGCGT TACATGTTGC TTACGGAACA 
AACGGAGCAT TAGTTCTTAC TATAGCTATT GCAGATCCTA CCGCATGGAT TATCGCCGGT 
AGTCAATTAG ATTGCATAGC TCGCGATAGA GCTTTTACAA ACTATCTTCC TGGCTTTAAT 
ATCCCAATGT TACCAAGGAT GTTATCTGAA GATTTATGTT CTTTACGTGC ATATGAAAAA 
CGACCGGCTT TAGTCTGCCA AGTTACTATG CAGCATGATG GAACACTAAA TGAAGACATG 
CGTTTTTTTG CGGCTTGGAT AGAATCTAAG GCTAAGCTTA GCTATGATGA AGTATCTGAT 
TGGATAGAAA ATATTGGTTT TTGGCAACCG CAGAATAATG CTATTGCAGA ACAGATTAGA 
ATGTTGCATA TAGTTTGCCA AGCTCGCAGT TCTTGGCGGA AACAACATGC TTTAGTATTT 
AAGGATAAAC CTGACTACCG TTTTATTTTG GAAGAAAATG GTAATGTGAA GAATATTATT 
GCTGAACCAC GTCGTATTGC TAAAAGAATG ATTGAAGAGG CTATGATTAC CGCGAATATA 
TGTGCTGCAC GTGTTCTACG TGATAATCTT GGTTTTGGGT TATATAATAC CCATAATGGT 
TTCGATACTA CTCTTATTGA TCAAGTAGTA GCTATTTTAC AAAAACATAA TATTTCAGTA 
GATGCTACTC AATTACTGAC CCTAGAAGGA TTCTGTGCTT TACGTCGTAA GTTAAATACT 
ATGTCAACCT CATATTTGGA TAGTAGAATT CGTCGCTTTC AGACCTTATC AGAGTTAAAA 
ACTGAACCTG GACCTCATTT TGGTCTAGGA TTAGAGGTTT ATGCTACGTG GACTTCACCT 
ATTCGAAAAT ATAGCGATAT GATGAATCAT CGTTTGCTGA AAGCCTTAAT AGGAGCCGGT 
AAAGCAGAAC GACCAAAAAC AGACATTACT TTCCGTATGT CTGAACGTAG GAGGCAAAAT 
CGCATTGCTG AAAGGGATGT AGAAGATTGG CTATATGCTA GTTTTTTAAA AAATCAAGTA 
GGAAGTCATA TTCGTTATAG TGCTGAGATT ATTGATATTT ATCGTAATGG TATGCGAATT 
AGACTACTAG ATAATGGTGC TATTGCTTTT ATCCCTGCCT TATTAATTCA TAACATACGT 
GATGAATTAA TTTGTAACCA AGATATTGGC ATTGTCCAGA TTCAAGGCAA AGAACGTTAC 
CGACAGGGGG ATACTATAGA AGTATATATT AAAGAAGTGC ATATAGATAA TCGTTCTATT 
ATTGCGAAAA TTGTCTAA 

 

Protein sequence

MFQDHPLLIQ LKQQLYDKEL RMVGVVKSTD KGFGFLEVNA QKSYFIPPLF MKKVMHGDKI 
SAVLRIVNNR AIAEPETLIE PFLSRFVGKV QIKNDKLALL PKHPLIKEII PASQPRSMKN 
TQLCHGDWVI AEMCHHPLDG YRYFYAKITE LITTKDDNFA HWRVTLAHYN LEREAPAMPK 
YLTIQDNGLI REDLTELNFI TIDHASTEDI DDALHVAYGT NGALVLTIAI ADPTAWIIAG 
SQLDCIARDR AFTNYLPGFN IPMLPRMLSE DLCSLRAYEK RPALVCQVTM QHDGTLNEDM 
RFFAAWIESK AKLSYDEVSD WIENIGFWQP QNNAIAEQIR MLHIVCQARS SWRKQHALVF 
KDKPDYRFIL EENGNVKNII AEPRRIAKRM IEEAMITANI CAARVLRDNL GFGLYNTHNG 
FDTTLIDQVV AILQKHNISV DATQLLTLEG FCALRRKLNT MSTSYLDSRI RRFQTLSELK 
TEPGPHFGLG LEVYATWTSP IRKYSDMMNH RLLKALIGAG KAERPKTDIT FRMSERRRQN 
RIAERDVEDW LYASFLKNQV GSHIRYSAEI IDIYRNGMRI RLLDNGAIAF IPALLIHNIR 
DELICNQDIG IVQIQGKERY RQGDTIEVYI KEVHIDNRSI IAKIV