Gene BCI_0235 details

Gene Information

• Locus tag: BCI_0235
• Symbol: mrdA
• ID: 4056260
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Baumannia cicadellinicola str. Hc (Homalodisca coagulata)
• Kingdom: Bacteria
• Replicon accession: NC_007984
• Strand: +
• Start bp: 251496
• End bp: 253361
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 637981587
• Product: penicillin-binding protein 2
• Protein accession: YP_588688
• Protein GI: 94677053
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0768] Cell division protein FtsI/penicillin-binding protein 2
• TIGRFAM ID: [TIGR03423] penicillin-binding protein 2

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAA CAAACGAACC ATTACGTAAC TCTTCAGCTG AATTAGCACT ATTTATGCGC 
CGAGTCACAA TATCATTTAC TATAATATTA CTACTTATTA GTATACTAAT AGCTCATTTA 
TATCAGTTAC AGGTTATTAG CTTTGAAAAT TATCGTAATC GATCTAATCA AAATAGCACT 
AAAATAATAC CAATTCTACC AAGTAGAGGA AAAATTTTTG ATCGTCACGG TACGCCAATA 
GCATTTAACC GTACTATTTA TCAACTAGAA TTAGTGGTAG AAAAAGTTAA TAATCTAAAA 
AAGACTCTCG ATGCTCTTCG TCCTCTTGTA GATCTTACTG ATCAAGATAT AGCTAATTTT 
AACAAAAAGC TACAAAATGC ACAAAAATTA ACGTCAATAC CATTAAAATT AGATCTTACT 
GATGTACAAC AGGCTCATTT TGCGGTGAAT AAGTTCCGTT TTCCTGGCGT AGAGATCAAA 
AAATACCAGC ATCGTTATTA CCCTTATTGC TCTACATTCA CCCATGTCAT CGGATATGTT 
TCAAAAATAA ATGCTAATAA TCTAGCTAAG CTAGAAAAAC AAGGCCTAAT ATCTAATTAT 
GCAGCAACAA ATGAAATCGG TCAACTAGGC ATTGAACGTT ACTATGAAAA TAAACTACAT 
GGTAGTATAG GCTATAATAA GGTTGAAGTT AATAACCGTG GTCATATTAT TCGTAATTTA 
TATCATCAGC TACCTGAATC AGGTAAAGAT ATTTATCTAA CAATCGATTT AAATCTACAA 
CAGTATATTA ACAAACTACT TACTGGGAAT CGTGCGGCAG TTGTCGTAAT AGATCCACGG 
GACAGTGGTA TTTTAGCATT AGTATCTAAC CCTAGTTTTA ATCCGAATCT TTTTGTAGAA 
GGTATTTCGA GTAACGATTA TCAAAATCTA CTTAATGATC ACAATTATCC TCTTATTAAC 
CGTGTAACTC AAGGGTTATA TCCTCCAGCT TCAACTGTGA AGCCTTATAT TGCAGTATCA 
GCATTAACAG TAGGAGTAAT TAACGAATAC TTCTCGATAT TTGACCCAGG ATGGTGGCAA 
TTACCAGGAT CAGGAAAACG CTATCGGGAC TGGAAACACT ATGGGCATGG TAAATTAAAT 
ATAATTAAGG CTATTGAGGA GTCAGCAGAT ACTTTATTTT ATCAAGTTGC TTATGATATG 
GGTATCGACC TACTAGCCGA GTGGATGATG AAATTTGGCT ATGGTCATTA TACGGGAATT 
GATATTACAG AGGAGCATAC GGGTATAATG CCAACACGTA ACTGGAAAAT GAAACGTTTT 
CATGAACCGT GGTATCCAGG AGACACAATT GTGGTTGGAA TTGGACAAGG ATATTGGACA 
GCTACACCAT TACAAATATT AAAAGCTCTA GTAACACTTA TTAACAATGG TTCTGTATAT 
AAACCACATT TACTGTTGGG AACAAGGGAA CAAGATGATA ATATAATATC ATATCATCAG 
TATGAAGAGA CGAATATTGG TGATCCTTAT TCTGGTTTTT GGGAGATAGC TAAAGATGGT 
ATGTATGGTG TTGCTAATCA TCCTAATGGT ACAGCACGTC ATTATTTTGC CAATACACCT 
TATAAGACAG CGGCAAAATC AGGTACTGCT CAAGTATATA GCTTAAAAGC AAATGAAAAA 
TATAATGTTC ATAAAATTAA TGAAAGGTTA CGTGATCATA AATGGATGAC AGCATTTGCT 
CCATACGATA ACCCAACAGT CTGTGTAGTA GTTTTATTAG AAAATGGCGG AATCGGGCCA 
TCTGCAGGTA CTATTACGAG AAATATTTTA GATTATATTC TACTATCTAA TAAAAAAAAT 
GCTTAA 

 

Protein sequence

MKKTNEPLRN SSAELALFMR RVTISFTIIL LLISILIAHL YQLQVISFEN YRNRSNQNST 
KIIPILPSRG KIFDRHGTPI AFNRTIYQLE LVVEKVNNLK KTLDALRPLV DLTDQDIANF 
NKKLQNAQKL TSIPLKLDLT DVQQAHFAVN KFRFPGVEIK KYQHRYYPYC STFTHVIGYV 
SKINANNLAK LEKQGLISNY AATNEIGQLG IERYYENKLH GSIGYNKVEV NNRGHIIRNL 
YHQLPESGKD IYLTIDLNLQ QYINKLLTGN RAAVVVIDPR DSGILALVSN PSFNPNLFVE 
GISSNDYQNL LNDHNYPLIN RVTQGLYPPA STVKPYIAVS ALTVGVINEY FSIFDPGWWQ 
LPGSGKRYRD WKHYGHGKLN IIKAIEESAD TLFYQVAYDM GIDLLAEWMM KFGYGHYTGI 
DITEEHTGIM PTRNWKMKRF HEPWYPGDTI VVGIGQGYWT ATPLQILKAL VTLINNGSVY 
KPHLLLGTRE QDDNIISYHQ YEETNIGDPY SGFWEIAKDG MYGVANHPNG TARHYFANTP 
YKTAAKSGTA QVYSLKANEK YNVHKINERL RDHKWMTAFA PYDNPTVCVV VLLENGGIGP 
SAGTITRNIL DYILLSNKKN A