| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0152 |
|---|
| Symbol | lysS |
|---|
| ID | 4056523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | + |
|---|
| Start bp | 168085 |
|---|
| End bp | 169605 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 27% |
|---|
| IMG OID | 637981507 |
|---|
| Product | lysyl-tRNA synthetase |
|---|
| Protein accession | YP_588620 |
|---|
| Protein GI | 94676799 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0072128 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAAAT TAAATATTTT TGATCCCGTA CAGAATTATG AAAATTTAAA TCAACAATTA
AATTTGCGTA GGAATAAATT AAATAATTTA CGTAAACAAG GGAAAACATT TACTAATAAT
TTCAAACGTA ATGTGATATC AAATCAATTA TTTTTACAAT ATGGAGAAAA AAACAACGAA
ACATTAAAAA CACTAAATAT ACAAGTCAGT TTAGCTGGTC GTATGATAAA TCGTCGTATT
ATGGGTAAAG CATCATTTGT TATTCTACAA GATAGTGGTG GAACAATACA ACTATATCTA
TCCTCAAAAA ATTTATCAGA TTCATTTTAT AATGAACATT TTAAAAAATG GGATTTAGGT
GATATTTTAG GAGTCCACGG TAGGTTATTC AAAACAAAAA CTGGTGAATT AACTATAAAC
TGTAATGAAA TAATTTTATT AACAAAAGCT TTACGTCCCA TACCCAATAA GTTTCATGGT
ATAGTTGATA AACAAATACG TTATCGACAA AGATATTTAG ATTTAATAAC AAATAAAAAT
TCTTTTAATT TATTTAAAAC TAGATCACAA ATTATAACAG AAATACGTCA ATTTTTAAAT
AAAGAAGATT TTATTGAAGT AGAAACTCCT ATTTTGCAAT CTTTACCAGG TGGTGCTACT
GCACGTCCAT TTATTACTTA CCATAATGCA TTAGATATGA ATCTATATCT TCGGATAGCA
CCAGAATTAT ATTTAAAACA ATTAATAATT GGTGGTTTCG AAAAAATTTT TGAAATTAAT
CGTAATTTTC GTAATGAAGG TTTATCTGCA CATCATAATC CAGAGTTTAC CATGATGGAA
CTTTATATAG CTTATGCAGA TTATCATGAT GTAATGTTAT TAACTCAAAA TTTATTAAAC
ACAATTACCA ATCATGTTTT AGGTACTAAT ATAATTCAAT ATGGTAATCT AAAGCTCGAT
TTTAGTAAAA ATTTTGTAAA AATGACTATG AAAGAAGCTA TTTGTCATTA TAATAAACAG
ATTTTATCTA AGCATTTAGA TGATAAAATG CAAGCAATAA CTTGTGCAAA AAATATTGGT
ATACATATAG ATCAAAAATG GGGTTTAGGT AGAATCCAAA CGGAAATATT TGAAAAAACG
ACAGAGAAAC ATTTATTACA ACCAACTTTC ATTACTTCTT ATCCAATAGA AGTATCACCA
CTTGCACGTC GTAATGATAA TAATCCATTT TTTGCTGATC GTTTTGAATT ATTTATTGGA
GGTTACGAAA TAGGTAACGG TTTCTCAGAA CTAAATGATT ATGAAGATCA AGCAAATCGC
CTTATTGAAC AAGCTACAAT AAAAAACAGT GGTGATAACG AATCAATGTT TTATGATGAA
GATTATATTA TTGCACTTGA ACATGGTTTG CCACCAACAG CTGGATTAGG TATTGGAATT
GATCGATTAG TTATGCTATT AACTAATAGT CATTTCATTC GAGATGTTAT TTTATTTCCA
ACAATGCGTC TCAAGATATA A
|
|---|
| Protein sequence | MCKLNIFDPV QNYENLNQQL NLRRNKLNNL RKQGKTFTNN FKRNVISNQL FLQYGEKNNE
TLKTLNIQVS LAGRMINRRI MGKASFVILQ DSGGTIQLYL SSKNLSDSFY NEHFKKWDLG
DILGVHGRLF KTKTGELTIN CNEIILLTKA LRPIPNKFHG IVDKQIRYRQ RYLDLITNKN
SFNLFKTRSQ IITEIRQFLN KEDFIEVETP ILQSLPGGAT ARPFITYHNA LDMNLYLRIA
PELYLKQLII GGFEKIFEIN RNFRNEGLSA HHNPEFTMME LYIAYADYHD VMLLTQNLLN
TITNHVLGTN IIQYGNLKLD FSKNFVKMTM KEAICHYNKQ ILSKHLDDKM QAITCAKNIG
IHIDQKWGLG RIQTEIFEKT TEKHLLQPTF ITSYPIEVSP LARRNDNNPF FADRFELFIG
GYEIGNGFSE LNDYEDQANR LIEQATIKNS GDNESMFYDE DYIIALEHGL PPTAGLGIGI
DRLVMLLTNS HFIRDVILFP TMRLKI
|
|---|
| |