| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCI_0141 |
|---|
| Symbol | atpD |
|---|
| ID | 4056537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007984 |
|---|
| Strand | - |
|---|
| Start bp | 156100 |
|---|
| End bp | 157473 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637981497 |
|---|
| Product | F0F1 ATP synthase subunit beta |
|---|
| Protein accession | YP_588610 |
|---|
| Protein GI | 94676869 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.773497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGG GAAAGATTAT ACAAGTTATC GGTGCCGTAG TCGATGTTGA GTTTCCGCAA
AATATCGTAC CCAAAGTTTA TAATGCACTA GAAGTTACTA ATGGAAAGAA TAAACTAATC
CTAGAAGTTG AACAACAATT AGGTAGTGGT ATTGTTCGTT GTATAGCAAT GGGAGTTTCT
GAAGGTTTAC GTCGAGGATT AACAGTTATT GATTTAGGCC ATGCAATTAA AGTACCAGTT
GGTAAATCAA CCTTAAGTCG TATTATGAAT GTCCTTGGTG AACCTATTGA CATGAAAGGA
ATAATTAATG CAGAAGAACA TTGGTCTATT CATCGATCTG CTCCTCGTTA TGAAGAATTA
GCTCTTTCAC AAGAAATTTT AGAAACTGGT ATTAAAGTTA TTGACTTAAT GTGTCCCCTT
GTTAAGGGAG GTAAAGCAGG TCTATTCGGT GGAGCTGGTG TTGGTAAAAC AGTAAATATG
ATGGAACTAA TCCGTAATAT TGCTATTGAG CATGCTGGTT ATTCAGTATT TACTGGAGTA
GGTGAGCGTA CCCGGGAAGG AAATGATTTT TATCATGAAA TGAAAGATTC CAATGTTCTT
GATAAAGTAT CACTCGTTTA TGGACAGATG AATGAACCAC CAGGTAATCG ATTTAGAGTA
GCGTTAACTG GTTTAACTAT AGCTGAAAAA TTTCGTGATG AAGGCCATGA TGTATTACTA
TTTATCGATA ATATTTACCG TTATACTTTA GCTGGAGCAG AAGTATCTGC GCTTCTAGGG
CGTATGCCTT CAGCCGTAGG ATATCAACCA ACACTATCAG AAGAAATGGG ACTATTACAG
GAACGCATTA CATCTACAAA ATATGGTTCT ATTACGTCTA TACAAGCCGT TTATGTCCCT
GCAGATGATT TAACCGATCC TGCGCCAGCT ACAACTTTCT CTCATCTTGA TGCTACTATT
GTACTTAGTC GTCAGATAGC TTCTTTAGGT ATTTATCCAG CTATTGATCC CCTAGAATCA
ACTAGTCGTC AGTTAGATCC ATTAGTAGTA GGTCAAAAAC ATTATGATGT TGCTCTTGGT
GTCCAAGGCA TTTTACAGCG ATATCAAGAA CTTAAAGATA TTATTGCTAT ACTTGGTATA
GATGAACTAT CCGAAGATGA TAAGATGGTT GTTTCTCGTG CCCGCAAAAT TCAACGTTTT
TTGTCACAAC CATTTTTTGT TGCAGAAGTA TTTACAGGTT CACAGGGTAA ATATGTTTCG
CTTCAAGAAA CTATCTCTGG TTTTGAGGAT ATTATTAATG GTAAGTATGA TCATTTACCA
GAACAAAAAT TTTATATGAT AGGTTCTATT AACGAAGCTA TGACTAAAGA ATAG
|
|---|
| Protein sequence | MTTGKIIQVI GAVVDVEFPQ NIVPKVYNAL EVTNGKNKLI LEVEQQLGSG IVRCIAMGVS
EGLRRGLTVI DLGHAIKVPV GKSTLSRIMN VLGEPIDMKG IINAEEHWSI HRSAPRYEEL
ALSQEILETG IKVIDLMCPL VKGGKAGLFG GAGVGKTVNM MELIRNIAIE HAGYSVFTGV
GERTREGNDF YHEMKDSNVL DKVSLVYGQM NEPPGNRFRV ALTGLTIAEK FRDEGHDVLL
FIDNIYRYTL AGAEVSALLG RMPSAVGYQP TLSEEMGLLQ ERITSTKYGS ITSIQAVYVP
ADDLTDPAPA TTFSHLDATI VLSRQIASLG IYPAIDPLES TSRQLDPLVV GQKHYDVALG
VQGILQRYQE LKDIIAILGI DELSEDDKMV VSRARKIQRF LSQPFFVAEV FTGSQGKYVS
LQETISGFED IINGKYDHLP EQKFYMIGSI NEAMTKE
|
|---|
| |