Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCI_0075 |
Symbol | tktA |
ID | 4056481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Baumannia cicadellinicola str. Hc (Homalodisca coagulata) |
Kingdom | Bacteria |
Replicon accession | NC_007984 |
Strand | - |
Start bp | 89439 |
End bp | 91436 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637981434 |
Product | transketolase |
Protein accession | YP_588553 |
Protein GI | 94676587 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAA GAAAAGCGTT CGCTAACGCA ATCCGTTTTT TAAGTATAGA CGCTATACAG AAAGCTAATT CAGGACATCC AGGGGCACCT ATGGGTATGG CTGATATCGC TGAAGTATTA TGGCGTGACT ATATGAATCA TAATCCGACC AACCCTAACT GGTTTAATCG CGATCGCTTT GTTCTGTCTA ATGGCCATAG TTCTATGCTA TTATATAGCA TCCTACATCT TACAGGATAT AATCTATCTC TAAAAGAAAT AGAAAATTTT CGTCAGCTAG ACTCAAAAAC ACCTGGACAT CCAGAATATG GATATACTGA TGGCGTAGAA ATATCTACTG GACCACTAGG TCAAGGTTTT GCTAATGCTG TAGGATTAGC TATCAGTGAA CGTACTTTAG CAGCACAGTT TAATCGTCCA AAACATGAAA TTATCAATCA TTATACTTAT GTATTTTTAG GTGATGGTTG TATGATGGAA GGTATTTCCC ATGAAGCAGG TTCATTAGCA GGTATCATGA AACTGGGAAA ATTAATTGCT TTTTACGATG ATAATGGCAT TTCTATCGAC GGTAATATAA AAGGTTGGTT CTGTGATAAT ACTGCTACTA GATTTGAAGC TTATGGTTGG CACGTAATAA GCAATGTTGA TGGACACGAT AGTAATGCAA TAAAAGCTAG TATAGAAAGT GCGAGAGCGG TTATTAATAA ACCATCATTA CTAATATGTA AAACTATTAT TGCATTTGGT GCACCCAATA AAGCAGGTCA TCATAGTACG CACGGTGCTC CGTTAGGAGA GCAGGAAATT ACGCTTACTA GAAAAGCTCT TAATTGGCAT GAGCCACCTT TCATTATTCC TTCTGATATC TATGATGGCT GGAATGCTAA AGAAGCTGGA CAGCAAAAAG AAAGAACATG GAATAATAAG TTATCGTTAT ATCAGAAAGC TTATCCAGAA TTAGCTAAAG AATTAAAACG TAGAATGACT GGTCATCTTC CAGAGAAATG GTGGGTAGAA AGCAAAAAAA TTATAGAAGA GTTACAAAAT AAACCCAAAA AAATTGCTAG TCGTAAAGCA TCGCAAAAAG TTTTAGAAGC ATTTGGTCCA ATATTGCCAG AACTTATCGG AGGTTCAGCT GACTTAAGTC CCAGTAATTT AACCTTATGG TCTAGATCTA TTTCTATTGT TGAGCATTTG GCAGGTAACT ATATTCACTA TGGTGTACGT GAATTTGGCA TGACTGCTAT TAGTAATGGT ATTGCTCATC ATGGAGGATT CCTTCCCTAT ACAGCAACTT TCTTAATTTT TGCTGAATAT GCTCGTAATG CGGTACGGAT GGCTGCAATG ATGAAAACAC GGCATATTAT GGTTTATACT CATGATTCTA TTGGTCTAGG TGAAGATGGT CCTACTCATC AACCAGTAGA ACAACTAGCG AGCTTACGCA TAACCCCTAA TATGAGTACT TGGCGTCCTT GTGATCAAGT GGAAACCGCC GTTGCTTGGA AACAAGCAAT AGAACGTAAT GATGGTCCAA CAGCACTAAT TTTGTCTCGC CAAGATTTAG TTCAACAAGA ACGTAGTGCG CAGCAATTAG CTAATATTGC TCGTGGAGGT TATATCTTAA AAAATTGTGT TGGATTACCG GAACTTATAA TAATAGCTAC TGGTTCTGAA GTTGAGCTAG CAGTAACTGC TTACCAGCGA TTAACCTATG AAGGTAGGCA AGTACGTATA GTATCAATGC CTTCTACTGA TATATTTGAT CAACAGGATA AAGAATATCG CGAATTAGTA TTACCAGCAA CTGTAACCGC ACGTATTGCT ATAGAAGCAA GCATTGCTGA TTATTGGTAT AAGTACGTAG GGCTAGATGG GATAATTATC GGTATGACTA CATTTGGTAA GTCAGCACCA GCAGAAGAAT TATTTAACAT ATTTGGTTTT ACCATTGATA ACTTACTGAG TAAAGCACAT ATACTATTAA CACGATAA
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Protein sequence | MISRKAFANA IRFLSIDAIQ KANSGHPGAP MGMADIAEVL WRDYMNHNPT NPNWFNRDRF VLSNGHSSML LYSILHLTGY NLSLKEIENF RQLDSKTPGH PEYGYTDGVE ISTGPLGQGF ANAVGLAISE RTLAAQFNRP KHEIINHYTY VFLGDGCMME GISHEAGSLA GIMKLGKLIA FYDDNGISID GNIKGWFCDN TATRFEAYGW HVISNVDGHD SNAIKASIES ARAVINKPSL LICKTIIAFG APNKAGHHST HGAPLGEQEI TLTRKALNWH EPPFIIPSDI YDGWNAKEAG QQKERTWNNK LSLYQKAYPE LAKELKRRMT GHLPEKWWVE SKKIIEELQN KPKKIASRKA SQKVLEAFGP ILPELIGGSA DLSPSNLTLW SRSISIVEHL AGNYIHYGVR EFGMTAISNG IAHHGGFLPY TATFLIFAEY ARNAVRMAAM MKTRHIMVYT HDSIGLGEDG PTHQPVEQLA SLRITPNMST WRPCDQVETA VAWKQAIERN DGPTALILSR QDLVQQERSA QQLANIARGG YILKNCVGLP ELIIIATGSE VELAVTAYQR LTYEGRQVRI VSMPSTDIFD QQDKEYRELV LPATVTARIA IEASIADYWY KYVGLDGIII GMTTFGKSAP AEELFNIFGF TIDNLLSKAH ILLTR
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