| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCG9842_B5709 |
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| Symbol | vacB |
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| ID | 7182254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus G9842 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011772 |
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| Strand | - |
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| Start bp | 4996953 |
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| End bp | 4999391 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643553019 |
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| Product | ribonuclease R |
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| Protein accession | YP_002448661 |
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| Protein GI | 218900250 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0120471 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGAAGAAA TCACACAAGA ACATATTGAT AAGTTGTTAT TATTTATGAG AGAAGAAGCG
TATAAACCGC TAACGATACA AGAGTTAGAA GAGGCATTTG GAATTGAAGG TTCTGAGGGC
TTTAAAGATT TTGTAAAAGC ACTTGTAATG ATGGAAGAGA AGGGACTTGT TATTCGTACA
CGTAGTAATC GATACGGTCT TCCTGAAAAG ATGAATTTAG TACGAGGTAA GTTAATTGGA
CATGCACGTG GCTTTGCTTT CGTTGTGCCA GAAGAGAAGA AAACTGGAGA CGATGATCTT
TTCATCCCTC CTACAGAATT AAACGGTGCA CTTCATGGCG ATACAGTATT AGCACGCCTT
AGTTCTCAAT CGAGCGGTTC ACGTCAAGAA GGTTCAATTG TACGCATTTT AGAGCGTGGA
ACGAAAGAAC TTGTTGGTAC ATATACAGAA TCGAAAAACT TTGGATTTGT TATACCTGAC
AATAAGCGCT GGACGAGTGA TATCTTTATC TTGAAAAGTG CATCAATGGG TGCTGTAGAA
GGTCATAAAG TAGTTGTGAA AATTACGAGC TATCCAGAAA ACCGTTTAAG CGCAGAAGGT
GAAGTTATTC AAATTCTAGG TCATAAAAAT GATCCAGGAG TAGATATTTT ATCTGTCATT
CATAAACATC ATTTACCTTT AGCATTCCCT GAAGAAGTGA TGGAGCATGC AAACAGTGTA
CCAGAAACGA TTTCAGAAGA AGATTTAAAG GATCGTCGTG ATTTACGTGA TCAAATGATC
GTAACGATTG ATGGTGCAGA CGCGAAAGAC TTAGATGATG CTGTTACAGT AACGAAGCTT
GAGAACGGTA ACTACAAGCT TGGCGTTCAC ATTGCGGATG TAAGTCATTA CGTTCAAGAA
GGTTCTCCAA TTGATGTAGA AGCAGCGGAA AGAGCGACGA GTGTGTATCT TGTTGACCGT
GTAATTCCGA TGATTCCACA TCGTCTATCT AACGGTATTT GCTCATTAAA CCCGAAAGTA
GACCGTCTGA CATTATCTTG TGAAATGGAA ATCAACAACT TAGGTGATGT TGTTAAACAC
GAGATTTTCC AAAGTGTGAT TAAAACGACA GAGCGTATGA CGTATGCTGA CGTAAGAAGC
ATTTTAGAAG ATGAGGACGA AGAGTTAATT AAGCGTTATG AGCCATTAGT ACCGATGTTT
AAAGAGATGG GTCAATTGGC ACAAATTCTA CGTGAAAAAC GTATGCGCCG TGGTGCAATT
GACTTTGACT TTAAAGAAGC GAAAGTATTA GTAGATGAAG AAGGAAAACC GACTGATGTT
GTTATGCGCG ATCGTTCTGT ATCAGAGAAG TTAATTGAAG AATTTATGCT TGTTGCGAAT
GAAACAGTAG CAGAGCACTT CCACTGGATG AACGTACCGT TTATGTACCG TGTCCATGAA
GATCCGAAAG AAGATAAGCT TGAGCGTTTC TTCGAGTTTG TAACGAACTT CGGATATGCG
GTAAAAGGAC GTGCGAATGA AGTACACCCT CGTGCGCTGC AACAAATTCT TGAAATGGTT
CAAGGACAGC CTGAAGAAGT AGTTATTTCA ACGGTTATGC TTCGTTCTAT GAAGCAAGCT
CGTTACGATG CGGATAGTTT AGGGCATTTC GGTTTATCAA CTGAGTTCTA CACACATTTC
ACATCACCAA TTCGTCGTTA CCCAGATACA ATCGTTCATA GATTAATTCG TGAATACATT
ATTAATGGTA AAGTCGACAA TGAAACGCAA GCAAAATGGC GTGAAAAATT ACCTGAGATT
GCAGAGCACT CTTCTAATAT GGAACGCCGT GCTGTTGAAG CAGAGCGTGA AACAGATGAG
ATGAAAAAAG CAGAGTATAT GGTTGATAAG ATCGGTGAAG AGTATGACGG TATGATTAGC
TCTGTAACAA ACTTCGGTTT ATTCGTAGAG CTTCCAAATA CAATTGAAGG TCTTGTACAC
GTTAGCTACT TAACGGATGA TTACTACCGT TATGACGAGC AGCATTTCGC TATGATCGGA
GAGCGTACAG GAAACGTATT CCGCATCGGT GACGAAATTA CAATTCGTGT TATTAACGTA
AATAAAGACG AGCGTGCAAT CGACTTTGAA ATCGTTGGCA TGAAAGGTAC ACCTCGTCGT
AAGTTCAAAG ATCGTCCAGT CGTTATCGAG CAGCCAAGAA CAGGCAGAAA GAAACGCGGT
GGACGTAGCG AGCGCAGTAA TGAGCGCGGC GGTGAACGTG GCACAGGTAG AAAGTTTGAC
CGTGGTGGCA AAGGTAAAAG CACAGGAAGA GGATCCGCAT CAGCAACAGC ATCCACGTCT
GCTAGTCAGC CAGGGAAAAA AGATGGTAAT GGCAAGAAGA AAAAAGGATT CTTCGAAAAC
GTACCAGGAT TCAAGAAGAA AAAGAAAAAG CGTAAGTAA
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| Protein sequence | MEEITQEHID KLLLFMREEA YKPLTIQELE EAFGIEGSEG FKDFVKALVM MEEKGLVIRT
RSNRYGLPEK MNLVRGKLIG HARGFAFVVP EEKKTGDDDL FIPPTELNGA LHGDTVLARL
SSQSSGSRQE GSIVRILERG TKELVGTYTE SKNFGFVIPD NKRWTSDIFI LKSASMGAVE
GHKVVVKITS YPENRLSAEG EVIQILGHKN DPGVDILSVI HKHHLPLAFP EEVMEHANSV
PETISEEDLK DRRDLRDQMI VTIDGADAKD LDDAVTVTKL ENGNYKLGVH IADVSHYVQE
GSPIDVEAAE RATSVYLVDR VIPMIPHRLS NGICSLNPKV DRLTLSCEME INNLGDVVKH
EIFQSVIKTT ERMTYADVRS ILEDEDEELI KRYEPLVPMF KEMGQLAQIL REKRMRRGAI
DFDFKEAKVL VDEEGKPTDV VMRDRSVSEK LIEEFMLVAN ETVAEHFHWM NVPFMYRVHE
DPKEDKLERF FEFVTNFGYA VKGRANEVHP RALQQILEMV QGQPEEVVIS TVMLRSMKQA
RYDADSLGHF GLSTEFYTHF TSPIRRYPDT IVHRLIREYI INGKVDNETQ AKWREKLPEI
AEHSSNMERR AVEAERETDE MKKAEYMVDK IGEEYDGMIS SVTNFGLFVE LPNTIEGLVH
VSYLTDDYYR YDEQHFAMIG ERTGNVFRIG DEITIRVINV NKDERAIDFE IVGMKGTPRR
KFKDRPVVIE QPRTGRKKRG GRSERSNERG GERGTGRKFD RGGKGKSTGR GSASATASTS
ASQPGKKDGN GKKKKGFFEN VPGFKKKKKK RK
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