Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B4887 |
Symbol | topB1 |
ID | 7185744 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | - |
Start bp | 398734 |
End bp | 400923 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643548190 |
Product | DNA topoisomerase III |
Protein accession | YP_002443902 |
Protein GI | 218895491 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAAAA GCGTTGTAAT CGCTGAAAAG CCTTCCGTTG CACGAGATAT TGCTCGTGTA CTGAAGTGTG ATAAAAAAGG AAACGGCTAT CTTGAGGGTA GTAAATATAT TGTAACTTGG GCTTTAGGTC ATCTCGTTAC ATTAGCAGAT CCAGAAAGCT ATGATGTGAA ATATAAACAG TGGAATTTAG AAGATTTACC GATGCTACCA GAGCGTTTGA AATTAACGGT TATTAAACAA ACTGGTAAAC AGTTTAATGC TGTAAAGAGT CAGCTACTTA GAAAAGATGT AAATGAAATT ATTGTAGCAA CAGACGCTGG ACGTGAAGGG GAATTAGTCG CACGCTGGAT CATCGATAAA GTTAAGCTAA ACAAACAAAT CAAACGTTTA TGGATTTCTT CTGTAACCGA TAAAGCAATT AAAGATGGTT TTGCAAATTT AAAACCAGGT AAAGCCTATG ACAATTTATA CGCTTCAGCA GTTGCACGTT CAGAAGCTGA CTGGTATATC GGTCTTAATG CAACTCGCGC TTTAACGACT CGCTTTAATG CTCAGTTAAA TTGCGGTCGT GTACAAACGC CTACTGTCGC TATGATTGCT AGTCGTGAAG ATGAAATCAA GAACTTCAAA GCACAAACTT ACTATGGCAT CGAAGCTCAA ACGATGGAGA AACTCAAACT TACTTGGCAA GATGCAAATG GCAATAGCCG TAGTTTTAAT AAAGAAAAAA TTGATGGTAT TGTAAAAGGT TTAGATAAAC AACATGCTAC TGTTGTGGAA ATTGATAAAA AACAGAAGAA GTCATTCTCT CCTGGTCTTT ACGATTTAAC TGAATTACAA CGTGATGCAA ATAAAAAGTT CGGTTACTCT GCGAAAGAAA CATTAAACAT TATGCAGAAG TTATATGAAC AACATAAAGT GCTAACGTAC CCTCGTACAG ATTCACGCTA CATTTCATCT GATATCGTTG AAACACTTCC AGAACGTTTA AAAGCATGTG GCGTTGGAGA GTACCGTCCT TTAGCACATA AAGTATTACA AAAGCCTATC AAGGCTAATA AATTATTTGT TGATGATAGT AAAGTAAGCG ATCATCATGC GATTATTCCA ACAGAAGGAT ACGTTAACTT CTCAGCATTC ACAGATAAAG AACGTAAAAT TTATGATTTA GTTGTGAAAC GTTTCTTAGC TGTTTTATTC CCAGCATTCG AATACGAGCA ACTAACATTA CGTACCAAAG TTGGTAGTGA AACGTTCATT GCACGCGGAA AAACAATTTT ACATGCTGGT TGGAAGGAAG TATACGAAAA TCGATTTGAA GACGATGATG TAACTGATGA CGTAAAAGAG CAGCTTCTAC CCCACATCGA AAAGGGCGAT ACATTAACTG TAAAGTTAAT TATGCAAACA TCAGGTCAAA CGAAAGCACC TGCACGCTTT AATGAAGCAA CTTTACTTTC AGCAATGGAG AATCCTACAA AATATATGGA TACGCAAAAT AAACAACTTG CTGATACGTT AAAATCGACT GGTGGATTAG GTACTGTAGC GACACGTGCA GATATTATCG ACAAACTTTT CAACTCTTTC TTAATTGAAA AACGTGGTAA AGATATTCAC ATTACATCAA AAGGTCGTCA ATTACTTGAT TTAGTACCAG AAGAGTTAAA ATCCCCTACA CTAACTGGTG AATGGGAACA AAAACTTGAG GCTATCGCAA AAGGTAAGCT GAAAAAAGAA GTATTCATTT CTGAAATGAA GAACTATACG AAAGAAATTG TTTCTGAAAT TAAATCGAGT GATAAAAAAT ATAAACATGA CAACATTTCA ACGAAGTCTT GTCCAGACTG CGGTAAACCA ATGCTAGAAG TAAACGGCAA AAAGGGAAAA ATGCTCGTAT GCCAAGATCG TGAATGTGGT CATCGTAAAA ATGTATCTCG TACAACAAAC GCTCGCTGTC CGCAATGTAA GAAGAAACTA GAATTACGTG GTGAAGGTGC AGGTCAAATC TTTGCATGTA AATGTGGCTA TCGCGAGAAA TTATCAACAT TCCAAGAGCG ACGTAAAAAA GAATCTGGAA ACAAAGCTGA TAAACGTGAC GTTCAAAAAT ATATGAAACA ACAGAAAAAA GAAGAAGAAC CATTAAACAA CCCGTTCGCA GACGCATTAA AAAAACTAAA GTTCGATTAA
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Protein sequence | MSKSVVIAEK PSVARDIARV LKCDKKGNGY LEGSKYIVTW ALGHLVTLAD PESYDVKYKQ WNLEDLPMLP ERLKLTVIKQ TGKQFNAVKS QLLRKDVNEI IVATDAGREG ELVARWIIDK VKLNKQIKRL WISSVTDKAI KDGFANLKPG KAYDNLYASA VARSEADWYI GLNATRALTT RFNAQLNCGR VQTPTVAMIA SREDEIKNFK AQTYYGIEAQ TMEKLKLTWQ DANGNSRSFN KEKIDGIVKG LDKQHATVVE IDKKQKKSFS PGLYDLTELQ RDANKKFGYS AKETLNIMQK LYEQHKVLTY PRTDSRYISS DIVETLPERL KACGVGEYRP LAHKVLQKPI KANKLFVDDS KVSDHHAIIP TEGYVNFSAF TDKERKIYDL VVKRFLAVLF PAFEYEQLTL RTKVGSETFI ARGKTILHAG WKEVYENRFE DDDVTDDVKE QLLPHIEKGD TLTVKLIMQT SGQTKAPARF NEATLLSAME NPTKYMDTQN KQLADTLKST GGLGTVATRA DIIDKLFNSF LIEKRGKDIH ITSKGRQLLD LVPEELKSPT LTGEWEQKLE AIAKGKLKKE VFISEMKNYT KEIVSEIKSS DKKYKHDNIS TKSCPDCGKP MLEVNGKKGK MLVCQDRECG HRKNVSRTTN ARCPQCKKKL ELRGEGAGQI FACKCGYREK LSTFQERRKK ESGNKADKRD VQKYMKQQKK EEEPLNNPFA DALKKLKFD
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