Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B1617 |
Symbol | |
ID | 7181463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | - |
Start bp | 3531519 |
End bp | 3532052 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643551424 |
Product | RNA polymerase sigma-70 factor, ECF subfamily |
Protein accession | YP_002447094 |
Protein GI | 218898683 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000014953 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0000017176 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAAAGTAA TCCCTTTATA TAAAATGATT ATAAAAGAAG AAACCGATGT TTCTTTAGCG AAAAAAGGCG ATCATGAAGC CTTTATAACG CTTATACATA CAGAAAAAGT GAAGATGTAT CGAATAGCAA AGGCGATGTT ACGTGATGAG ACAAATATAG AGGACGCGAT ACAGACAACA ATTTTAAAAG CTTATGAAAA TATAAAAAAA CTAAAAAAAG AAGAGTTTTT TCAAACTTGG TTAATTCGAA TTTTAATGAA TGAGTGTAAC AATATTATTA GAGCGTATAA AAATGTAATT GTGACAGAAG AGAATGATTA CAATATGAGT GCGTGTGATC AGTATGAAGA TATAGATTTG TATAATGCGA TTCAATCGTT ACATGAAGAA TTAAGAGCTG TTACGGTGCT TTATTACTAT GAAGATATGA ATCAAGATAG TATTGCGAAG CTGTTAGAAA TACCGAAAGG AACAGTGAAA TCAAGATTAT CGCGTGCGAG GGAACAACTA CAAAAAAGAT TAAAGATGGA ATAG
|
Protein sequence | MKVIPLYKMI IKEETDVSLA KKGDHEAFIT LIHTEKVKMY RIAKAMLRDE TNIEDAIQTT ILKAYENIKK LKKEEFFQTW LIRILMNECN NIIRAYKNVI VTEENDYNMS ACDQYEDIDL YNAIQSLHEE LRAVTVLYYY EDMNQDSIAK LLEIPKGTVK SRLSRAREQL QKRLKME
|
| |