Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCG9842_B0539 |
Symbol | phoP |
ID | 7182566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus G9842 |
Kingdom | Bacteria |
Replicon accession | NC_011772 |
Strand | - |
Start bp | 4521603 |
End bp | 4522322 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643552486 |
Product | DNA-binding response regulator PhoP |
Protein accession | YP_002448153 |
Protein GI | 218899742 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.000130788 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACAATC GTATTTTAGT AGTTGATGAT GAGGAATTTA TCTTAACTTT AATTGAATTT AATTTACAAC AAGCTGGGTT TGAAGTTATA ACAGCGATGG ATGGAGAAAT GGCGCTTCAA AAAGCGACAA CAGAACGCCC AGATTTAATT ATATTAGATT TAATGCTTCC GAAAATGGAT GGTATGGAAG TGTGTAAAGA ATTACGATTG CAGCGCGTTA TGACGCCGAT TTTAATGTTA ACGGCAAAAG ATGATGAGTT TGATAAGGTG CTAGGTCTTG AACTTGGGGC AGATGATTAT ATGACGAAGC CATTTAGTCC AAGAGAAGTT GTTGCTCGTG TGAAGGCAAT TTTGCGCCGC ACGAAATTAC AACAAGAAGA ACAAGTTGCA GAAGCGCCAG ATGAAGATAG CATTACAATT GCAGAACTTA AAATTTTACC GGAGTTTTAT GAGGCTTATT TCCAAGGAAG AAAGCTTGAA TTAACACCAA AAGAATTTGA ACTACTTGTG TATCTCGCGA AAAATAAAAG TCGCGTGTTG ACGCGTGATC AATTATTAAG TGCTGTATGG AATTACGATT TTGCTGGTGA TACACGAATT GTTGATGTTC ATATTAGCCA TTTGCGCGAT AAAATTGAAC AAAATACGAA AAAACCGACG TACATTAAAA CGATACGTGG TTTAGGATAT AAATTAGAGG AGCCAAAAGG GAATGAATAA
|
Protein sequence | MNNRILVVDD EEFILTLIEF NLQQAGFEVI TAMDGEMALQ KATTERPDLI ILDLMLPKMD GMEVCKELRL QRVMTPILML TAKDDEFDKV LGLELGADDY MTKPFSPREV VARVKAILRR TKLQQEEQVA EAPDEDSITI AELKILPEFY EAYFQGRKLE LTPKEFELLV YLAKNKSRVL TRDQLLSAVW NYDFAGDTRI VDVHISHLRD KIEQNTKKPT YIKTIRGLGY KLEEPKGNE
|
| |