Gene BCE_4478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCE_4478 
Symbol 
ID2750351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus ATCC 10987 
KingdomBacteria 
Replicon accessionNC_003909 
Strand- 
Start bp4147447 
End bp4148106 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content37% 
IMG OID637281276 
ProductTPR domain-containing protein 
Protein accessionNP_980771 
Protein GI42783524 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.404717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA AACTTGAAAC AGGTATTCAA TATATGCAAG AAGGAAACTG GGAAGAAGCT 
GCTAAAAATT TCACAGAAGC AATCGAAGAA AATCCGAAAG ATGCGCTTGG ATATATTAAT 
TTTGCAAACT TATTAGATGT ACTAGGTGAT AGTGAGAGAG CAATTTTATT TTATAAACGT 
GCATTAGAGT TAGATGATAA ATCTGCGGCT GCTTATTATG GATTAGGAAA CGTATATTAC 
GGTCAAGAGC AATTTGCAGA GGCTAAAGCT GTATTTGAAC AAGCGATGCA AGCTGGATTA 
CAATCAGCTG ATGTAACGTT TATGTTAGGT ATTACACATG TGCAACTTGG AAATGATCGT 
CTTGCACTGC CGTTTTTACA AAGAGCAACA GAATTAGATG AAAACGATGT AGAAGCTTTG 
TTCCAGTGCG GACTTTGCTT TGCGCGACTA GAACATATTC AAGAGGCGAA ACCTTATTTT 
GAAAAGGTAT TAGAAATGGA TGAAGAGCAT GCAGATGCGT ATTATAATTT AGGTGTTGCC 
TACGTATTTG AGGAAAAAAA TGAGAAGGCT CTCGCTTTAT TTAAGAAAGC AACTGAAATT 
CAGCCAGATC ACTTTTTAGC GGGTAATGGT GTTCGTTTAT TAGAGCAAGA AGCTGAATAA
 
Protein sequence
MSNKLETGIQ YMQEGNWEEA AKNFTEAIEE NPKDALGYIN FANLLDVLGD SERAILFYKR 
ALELDDKSAA AYYGLGNVYY GQEQFAEAKA VFEQAMQAGL QSADVTFMLG ITHVQLGNDR 
LALPFLQRAT ELDENDVEAL FQCGLCFARL EHIQEAKPYF EKVLEMDEEH ADAYYNLGVA 
YVFEEKNEKA LALFKKATEI QPDHFLAGNG VRLLEQEAE