Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCE_4009 |
Symbol | cad |
ID | 2748661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus ATCC 10987 |
Kingdom | Bacteria |
Replicon accession | NC_003909 |
Strand | + |
Start bp | 3755392 |
End bp | 3756873 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637280808 |
Product | lysine decarboxylase |
Protein accession | NP_980304 |
Protein GI | 42783057 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00245624 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTATAGAT TGTCCCAATA CGAAACACCA TTGTTTACCG CTTTAGTTGA GCACAGTAAG CGAAATCCAA TTCAATTCCA TATTCCAGGG CATAAAAAAG GACAGGGCAT GGATCCTGAA TTTCGCGAAT TTATTGGGCA TAATGCATTA GCAATTGATT TAATTAATAT TGCGCCGCTC GATGATTTAC ATCATCCAAA AGGTATGATT AAAGAAGCAC AGGATTTAGC AGCCGCTGCA TTTGGTGCGG ATCATACTTT CTTTTCTATT CAAGGTACAA GTGGCGCAAT TATGACAATG GTGATGAGCG TTTGCGGTCC TGGTGACAAA ATACTAGTAC CACGAAACGT GCATAAATCA GTAATGTCAG CTATTATTTT CTCAGGTGCA AAACCTATTT TCATGCATCC TGAAATTGAT CCAAAACTTG GTATTTCACA TGGAATCACA ATTCAATCTG TCAAAAAGGC ACTTGAAGAG CACTCAGATG CGAAAGGCCT ACTTGTTATT AACCCAACAT ACTTTGGCTT TGCTGCGGAC TTAGAACAGA TTGTACAATT AGCACATTCT TACGATATCC CTGTACTCGT TGATGAGGCT CATGGTGTTC ATATTCATTT TCACGATGAA CTGCCGATGT CAGCGATGCA AGCCGGTGCA GATATGGCAG CAACAAGTGT TCACAAATTA GGTGGATCTT TAACGCAAAG TTCTATTCTT AATGTAAAAG AAGGCCTTGT GAACGTAAAA CATGTTCAAT CTATTATTAG CATGCTTACG ACTACATCAA CGTCTTACAT CTTGTTAGCC TCCCTAGATG TTGCTAGAAA ACGTCTTGCT ACAGAAGGAA CGGCACTCAT AGAACAAACA ATACAATTAG CGGAACAAGT TCGTGATGCT ATAAATGATA TCGAACATCT TTACTGTCCA GGGAAAGAAA TGCTAGGTAC GGATGCTACT TTTAACTATG ATCCTACAAA GATAATTGTA TCTGTAAAAG ATTTAGGTAT TACAGGCCAT CAGGCTGAAG TATGGCTTAG AGAGCAATAT AACATTGAAG TAGAGCTCTC AGATTTATAC AACATACTAT GTCTTGTCAC TTTTGGGGAT ACAGAAAGTG AGACAAATAC ACTTATTGCA GCATTACAAG ATTTATCAGC AACATTTAAA AATAAAGCTG ATAAAGGTGT TCAAGTGCAA GTAGAAATTC CAGAAATACC TGTTTTAGCA CTTTCTCCTC GAGATGCTTT TTATTCGGAA ACAGAAGTCA TCCCATTTGA AAATGCAGCA GGTCGTATTA TAGCTGATTT CGTTATGGTT TATCCGCCAG GGATTCCAAT CTTTACTCCG GGGGAAATTA TTACACAAGA TAACTTAGAG TATATTCGTA AAAACTTAGA AGCAGGTTTA CCTGTACAAG GTCCTGAAGA TATGACATTA CAAACATTAC GCGTGATTAA AGAGTACAAG CCTATCAGTT GA
|
Protein sequence | MYRLSQYETP LFTALVEHSK RNPIQFHIPG HKKGQGMDPE FREFIGHNAL AIDLINIAPL DDLHHPKGMI KEAQDLAAAA FGADHTFFSI QGTSGAIMTM VMSVCGPGDK ILVPRNVHKS VMSAIIFSGA KPIFMHPEID PKLGISHGIT IQSVKKALEE HSDAKGLLVI NPTYFGFAAD LEQIVQLAHS YDIPVLVDEA HGVHIHFHDE LPMSAMQAGA DMAATSVHKL GGSLTQSSIL NVKEGLVNVK HVQSIISMLT TTSTSYILLA SLDVARKRLA TEGTALIEQT IQLAEQVRDA INDIEHLYCP GKEMLGTDAT FNYDPTKIIV SVKDLGITGH QAEVWLREQY NIEVELSDLY NILCLVTFGD TESETNTLIA ALQDLSATFK NKADKGVQVQ VEIPEIPVLA LSPRDAFYSE TEVIPFENAA GRIIADFVMV YPPGIPIFTP GEIITQDNLE YIRKNLEAGL PVQGPEDMTL QTLRVIKEYK PIS
|
| |