| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCE_3530 |
|---|
| Symbol | |
|---|
| ID | 2750989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus ATCC 10987 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003909 |
|---|
| Strand | - |
|---|
| Start bp | 3282326 |
|---|
| End bp | 3283717 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637280332 |
|---|
| Product | glycolate oxidase, subunit GlcD, putative |
|---|
| Protein accession | NP_979828 |
|---|
| Protein GI | 42782581 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.692393 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA CAGTAGAGCG TTTAGTAAAT GAATTAAAAA ACGTAATTCC TGAAGATCGA
GTAGTAATCA ATACGACAGT AAGAGAGTTA CATAGTAAAG ATGAATCTTA TCATGCTAGT
AGTTTACCTG ATGTAGTAGT TTTTCCGAAA ACGACCGAAG AAGTTAGCGC GATAATGAAA
GTAGCGAGTC AGCACGGAAC AGCTGTCGTT CCGTTTGGAG TAGGGTCCAG TTTAGAGGGA
CACGTAATTC CTTATGAAAA AGGGATTACA GTTGATTTTT CGTTAATGAA CAAAATTCTT
GAAATAAGAG AGAAAGATTT TCTAGTGAGA GTACAACCAG GAGTGACTCG CTCTCAGCTT
AATAAAGAAT TGAAAAAGTA TGGATTGTTT TTTAGTGTGG ATCCAGGAGC AGATGCAACG
TTAGGTGGAA TGGCTGCTAC AAATGCAAGC GGAACGACAG CGGTTAAGTA TGGAGTAATG
CGTAATCAAG TTCGTGATTT AGAAGTCGTT CTTGCTGATG GAGAAGTAAT ACATACTGGG
AATTTAGCGG CGAAGTCATC ATCAGGTTAC CATTTAAACG GTGTTTTCGT AGGGTCAGAA
GGGACGCTTG GATGTTTTAC GGAATTAACA CTAAAAGTAT ACGGTATACC AGAACATGTT
ATGGCCGCGA GAGCATCGTT TCCGGCTATA AATGATGCAG TAGAAGCTGT TATTAACATA
TTACAAGCGG GTATTCCGAT TGCGAGAATT GAACTCGTTG ATGAACTATC TATGAAACAA
GTCAATCATT ATAGTGAAAC AAGTTACAGA GAAGAGCCTA CGCTGTTTTT AGAGTTTCAT
GGTAATGAAG CAGGGCTAAA GCAAGATATT GAGTTTACGA AAGAAATTGT TTTTGATCAT
AAATGTAAAG AAGTTGCTTT TGAAACGGAA ACGGCAGCGA GAAATAAATT ATGGGATGCG
CGGCATAATC TAGCATACGC TTACGTCCAT AGCTATCCTG GTAAAAAGCT TATGAGTACA
GACGTATGTG TACCAATTTC AGAATTGGCT GGGGCAATTC AACATGCGAG AGAGACATTA
GATAAGGTTG GTCTTGTTGG TGGTATTCTT GGTCATGTAG GAGATGGGAA TTTCCATGTG
CTTTTAATGG TTGATCCTAA CGATAAAGAA GAAGTGGAAA AGGCAGACGA AATAAATGAA
AGTATCGTTT TATATGCTCT TAAACGAGGG GGAACGTGTA CGGGAGAACA TGGCGTTGGA
ATCGGAAAGC GGAAGTATCA AGAAGAAGAA CATGGGGCGG CATTACTCGT AATGGAGAAA
ATAAAGAAAG CTCTTGACCC GCAAAATATT TTGAATCCGA ATAAAGTTTT TCAGTTAAAG
GATAGGGGCT GA
|
|---|
| Protein sequence | MEITVERLVN ELKNVIPEDR VVINTTVREL HSKDESYHAS SLPDVVVFPK TTEEVSAIMK
VASQHGTAVV PFGVGSSLEG HVIPYEKGIT VDFSLMNKIL EIREKDFLVR VQPGVTRSQL
NKELKKYGLF FSVDPGADAT LGGMAATNAS GTTAVKYGVM RNQVRDLEVV LADGEVIHTG
NLAAKSSSGY HLNGVFVGSE GTLGCFTELT LKVYGIPEHV MAARASFPAI NDAVEAVINI
LQAGIPIARI ELVDELSMKQ VNHYSETSYR EEPTLFLEFH GNEAGLKQDI EFTKEIVFDH
KCKEVAFETE TAARNKLWDA RHNLAYAYVH SYPGKKLMST DVCVPISELA GAIQHARETL
DKVGLVGGIL GHVGDGNFHV LLMVDPNDKE EVEKADEINE SIVLYALKRG GTCTGEHGVG
IGKRKYQEEE HGAALLVMEK IKKALDPQNI LNPNKVFQLK DRG
|
|---|
| |