| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_3845 |
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| Symbol | topA |
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| ID | 7191621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH820 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011773 |
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| Strand | - |
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| Start bp | 3683190 |
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| End bp | 3685268 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643557256 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_002452795 |
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| Protein GI | 218904961 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 6.270330000000001e-60 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCAGATT ACCTCGTAAT CGTGGAGTCG CCTTCTAAGG CGAAGACCAT TGAGAAATAT
TTAGGGAAAA AATACAAAGT TGTCGCGTCT ATGGGACACG TTCGCGATTT ACCTAAAAGC
CAAATGGGGA TAGAAGTAAA GAACAACTTC ACCCCGAAGT ATATTACCAT TCGTGGTAAA
GGTCCCGTCT TAAAAGACTT AAAATCAGCG GCAAAAAAAG CAAAGAAAGT CTATCTCGCG
GCCGATCCAG ACCGCGAAGG AGAAGCTATT GCTTGGCATT TAGCCAATAC GTTAAATGTG
GACGTTGAAT CAGATTGCCG AGTTGTGTTT AATGAGATTA CAAAAGATGC AATAAAAGAA
TCATTCAAAC ATCCTCGTGC AATTAACATG GATTTAGTAG ATGCACAACA AGCAAGACGT
ATACTAGATC GTCTTGTTGG TTACAATATT AGTCCTTTAT TATGGAAGAA AGTAAAAAAA
GGATTAAGTG CAGGGCGCGT ACAATCGGTA GCAGTTCGTT TAATTATCGA ACGTGAAAGA
GAAATTCAAA GTTTCGAGCC TGAAGAATTC TGGACAATTA AAACAGAATT TGTGAAAGGG
AAAGACACAT TTGAAGCAAG CTTTTACGGT GTAGATGGTG AAAAAGTTCA ATTAACGAAT
GAAACACAAG TGAATGAAAT AATTGAACAG CTGAAAGATA ATGCGTTCTC AGTTGAAAAT
GTAACGCGAA AAGAGCGAAA ACGTAATCCT GCATTACCAT TTACAACATC TTCCTTGCAA
CAAGAGGCAG CGCGTAAGTT AAACATGCGA GCAAAGAAAA CGATGATGCT TGCGCAGCAA
TTGTATGAAG GGATCGATCT TGGAAAACAA GGAACTGTAG GTCTTATTAC GTATATGAGA
ACTGATTCAA CACGTATCTC AGAAACAGCT CAAACAGAGG CACGTACTTA TATTACTGAG
GCGTATGGTA CGGAATACAT AGGAGCAGAA AAGAAGAAAG AAACGAAGAA GTCGAACGCA
CAAGATGCGC ATGAGGCAAT TCGTCCTACT TCGGTAATGA GAAAGCCAGA GGAATTAAAG
AGTTTCTTAA GTCGTGATCA ACTTCGATTG TATAAATTGA TTTGGGAGCG ATTTGTTGCA
AGTCAAATGG CGTCTGCTAT AATGGATACT GTGACAGCGA GACTCATTAA TAACAATGTT
CAGTTCCGTG CAAGTGGATC GGTTGTAAAG TTCCCAGGAT TTATGAAAGT GTATGTAGAG
TCGAAAGATG ACGGGGCGGA AGAAAAGGAT AAGATGTTGC CACCTTTAGA AGTAGGGGAA
ACCGTATTTT CGAAGGATTT AGAACCGAAG CAGCACTTTA CACAACCTCC GCCGCGCTAT
ACTGAGGCTC GTCTAGTAAG AACACTTGAA GAGCTTGGAA TTGGAAGACC GTCGACTTAC
GTACCGACAC TTGAAACGAT TCAAAAACGT GGATATGTCG GTTTGGATAA TAAACGCTTC
GTTCCAACTG AACTTGGTGA AATAGTAATT GAACTTATTT TAGAGTTTTT CCCAGAAATT
ATTAACATTG AATTTACTGC TAACATGGAG CAAAGCCTCG ATGAAGTAGA AGAAGGAAAT
GCAAATTGGG TAAAAATTGT TGATGATTTC TACGTAGGGT TTGAACCGCG TTTAGAAAAA
GCGGAAAAAG AAATGCGTGA AGTAGAAATT AAAGATGAAC CAGCTGGGGA AGACTGTGAA
TTATGTAATC ACCCAATGGT CTTTAAAATG GGTAAATACG GGAAATTTAT GGCTTGCTCG
AATTTCCCAG ATTGTCGTAA TACAAAACCG ATTGTGAAAG AAATCGGTGT TACTTGTCCG
AAATGCGATA AAGGTCAAAT TATTGAACGT CGTAGTAATA AAAAGAAACG TCTGTTCTAT
GGATGCGGTA CGTATCCAGA GTGTGACTTT GTATCTTGGG ATAAGCCGAT TGGCCGTAAA
TGTCCGAAGT GTGAAGGTAT GCTAGTAGAG AAGAAGTTGA AAAAAGGCGT ACAAGTACAA
TGTATTTCGT GTGATTATGA AGAAGAACAA CAAATGTGA
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| Protein sequence | MSDYLVIVES PSKAKTIEKY LGKKYKVVAS MGHVRDLPKS QMGIEVKNNF TPKYITIRGK
GPVLKDLKSA AKKAKKVYLA ADPDREGEAI AWHLANTLNV DVESDCRVVF NEITKDAIKE
SFKHPRAINM DLVDAQQARR ILDRLVGYNI SPLLWKKVKK GLSAGRVQSV AVRLIIERER
EIQSFEPEEF WTIKTEFVKG KDTFEASFYG VDGEKVQLTN ETQVNEIIEQ LKDNAFSVEN
VTRKERKRNP ALPFTTSSLQ QEAARKLNMR AKKTMMLAQQ LYEGIDLGKQ GTVGLITYMR
TDSTRISETA QTEARTYITE AYGTEYIGAE KKKETKKSNA QDAHEAIRPT SVMRKPEELK
SFLSRDQLRL YKLIWERFVA SQMASAIMDT VTARLINNNV QFRASGSVVK FPGFMKVYVE
SKDDGAEEKD KMLPPLEVGE TVFSKDLEPK QHFTQPPPRY TEARLVRTLE ELGIGRPSTY
VPTLETIQKR GYVGLDNKRF VPTELGEIVI ELILEFFPEI INIEFTANME QSLDEVEEGN
ANWVKIVDDF YVGFEPRLEK AEKEMREVEI KDEPAGEDCE LCNHPMVFKM GKYGKFMACS
NFPDCRNTKP IVKEIGVTCP KCDKGQIIER RSNKKKRLFY GCGTYPECDF VSWDKPIGRK
CPKCEGMLVE KKLKKGVQVQ CISCDYEEEQ QM
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