| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5671 |
|---|
| Symbol | trmE |
|---|
| ID | 7075529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 5265277 |
|---|
| End bp | 5266653 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643454065 |
|---|
| Product | tRNA modification GTPase TrmE |
|---|
| Protein accession | YP_002341554 |
|---|
| Protein GI | 217962976 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0486] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTG ATACAATTGC CGCGATTTCC ACAGCGCTTG GAGAGGGTGC AATTGCCATT
GTTCGAGTAA GTGGGGATGA TGCGGTTGAA AAAGTTAATC GTATTTTTAA AGGGAAGGAT
TTAACAGAGG TTCCTTCTCA TACAATTCAT TATGGTCATA TTGTTGATTT AGATACAAAT
CAGGTTATTG AAGAAGTAAT GGTGTCCATT ATGCGTGCAC CAAGGACTTT TACACGTGAA
AATATAGTAG AAATTAACTG TCACGGTGGA CTTGTTTCGG TAAACAAAGT ATTACAGCTT
ATTTTAGCGC AAGGGGTAAG ATTAGCGGAG CCTGGTGAAT TTACAAAACG TGCTTTTTTA
AATGGCCGTA TTGATTTATC ACAAGCAGAA GCTGTTATGG ACTTAATCCG TGCAAAAACA
GATCGTGCAA TGAACGTAGC GATTAATCAA ATGGAGGGAC GATTATCTAA ATTAATCGGC
CGTCTGCGCC AGGATATATT AGAAACATTA GCTCATGTTG AGGTAAACAT AGATTACCCG
GAATATGATG ATGTGGAAGA AATGACACAT AATATTTTAA TTGAGAAAGC TACACATGTT
CGTGCTGAAA TTGCAAAAAT ATTAGAAACA TCAAAGCAAG GAAAGATTTT ACGTGAAGGT
ATTGCTACTG CAATCATCGG TAGACCTAAT GTTGGGAAAT CATCGCTATT AAATAGTCTC
GTTCAGGAGA AAAAGGCAAT TGTAACTGAT ATTGCAGGAA CAACTCGTGA TGTTATTGAA
GAGTACGTTA ATGTGCGTGG TGTACCACTT AAACTTATAG ATACGGCCGG AATTCGTGAA
ACAGAAGATG TTGTTGAACG AATTGGTGTA GAGCGTTCAA AAGAAATGAT GAGTCAAGCT
GATTTAGTGT TAGTTGTCGT TAATTATAGC GAAGCTTTAA CGAATGAGGA TGAAGATCTA
TTCCGTGCCG TACAAGGAAA AGATTTCATT GTTATTGTAA ATAAGACAGA TTTACCGCAA
GCAATTGATA TGGAACGTGT TATAGAATTA GCAGCGGGGA ATCGTGTTAT TACAACGTCG
TTAATTGAGG AACAGGGAAT AGATGAGCTT GAAACGGCAA TCGCTGATTT ATTCTTTGAA
GGAACAATTG ATTCTGCAGA TGTAACATAT GTTTCTAACG CGAGACATAT TGGATTATTA
ACACAAGCAG GAAAAACAAT TGGAGATGCA ATTGAGGCGA TAGAAAATGG TGTTCCAATT
GATATGGTGC AGATTGATTT AACAAGAACG TGGGAAATAC TTGGTGAAAT TACTGGTGAC
ACCGTTCATG AGAGCTTAAT TGACCAGTTG TTCTCTCAAT TTTGTTTAGG AAAATAA
|
|---|
| Protein sequence | MEFDTIAAIS TALGEGAIAI VRVSGDDAVE KVNRIFKGKD LTEVPSHTIH YGHIVDLDTN
QVIEEVMVSI MRAPRTFTRE NIVEINCHGG LVSVNKVLQL ILAQGVRLAE PGEFTKRAFL
NGRIDLSQAE AVMDLIRAKT DRAMNVAINQ MEGRLSKLIG RLRQDILETL AHVEVNIDYP
EYDDVEEMTH NILIEKATHV RAEIAKILET SKQGKILREG IATAIIGRPN VGKSSLLNSL
VQEKKAIVTD IAGTTRDVIE EYVNVRGVPL KLIDTAGIRE TEDVVERIGV ERSKEMMSQA
DLVLVVVNYS EALTNEDEDL FRAVQGKDFI VIVNKTDLPQ AIDMERVIEL AAGNRVITTS
LIEEQGIDEL ETAIADLFFE GTIDSADVTY VSNARHIGLL TQAGKTIGDA IEAIENGVPI
DMVQIDLTRT WEILGEITGD TVHESLIDQL FSQFCLGK
|
|---|
| |