Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A5548 |
Symbol | speE |
ID | 7075725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | - |
Start bp | 5142500 |
End bp | 5143327 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643453944 |
Product | spermidine synthase |
Protein accession | YP_002341437 |
Protein GI | 217962859 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTAT GGTTCACTGA AAAACAAACA AAACATTTTG GGATTACGGC GCGTATTAAC CGCACATTAC ATACGGAGCA AACAGAATTC CAAAAACTTG ATATGGTCGA AACGGAAGAG TTCGGAAACA TGCTTATTTT AGATGGCATG GTTATGACAA CAGAAAAAGA TGAGTTCGTT TATCATGAAA TGGTAGCGCA CGTACCTTTA TTTACACATC CAAACCCTGA AAACGTATTA GTTGTAGGTG GCGGCGATGG CGGTGTTATT CGTGAAGTGT TAAAACACCC AAGCGTAAAG AAAGCAACTC TTGTTGAAAT CGATGGAAAA GTAATTGAGT ACTCTAAACA GTACTTACCA TCAATTGCAG GTGCATTAGA TAATGAGCGT GTAGAAGTAA AAGTAGGAGA CGGTTTCCTA CATATCGCAG AAAGCGAAAA TGAATATGAC GTAATTATGG TAGATTCTAC TGAGCCAGTA GGACCAGCAG TAAACCTATT TACAAAAGGC TTCTACGCTG GAATTTCAAA AGCGTTAAAA GAAGATGGTA TTTTCGTTGC ACAAACGGAC AACCCTTGGT TTACGCCAGA ACTAATTACA ACTGTGTTTA AAGATGTAAA AGAGATTTTC CCAATTACTC GTTTATACAC AGCGAACATT CCAACTTACC CAAGCGGTCT TTGGACGTTC ACAATCGGAT CTAAAAAACA TGATCCATTA GAAGTAAGTG AAGAGCGTTT CCACGAAATC GAAACGAAAT ACTACACAAA AGAATTACAC AATGCAGCAT TCGCATTACC GAAATTTGTT GGCGATTTAA TTAAGTAA
|
Protein sequence | MELWFTEKQT KHFGITARIN RTLHTEQTEF QKLDMVETEE FGNMLILDGM VMTTEKDEFV YHEMVAHVPL FTHPNPENVL VVGGGDGGVI REVLKHPSVK KATLVEIDGK VIEYSKQYLP SIAGALDNER VEVKVGDGFL HIAESENEYD VIMVDSTEPV GPAVNLFTKG FYAGISKALK EDGIFVAQTD NPWFTPELIT TVFKDVKEIF PITRLYTANI PTYPSGLWTF TIGSKKHDPL EVSEERFHEI ETKYYTKELH NAAFALPKFV GDLIK
|
| |