Gene BCAH187_A4243 details

Gene Information

• Locus tag: BCAH187_A4243
• Symbol: ribD
• ID: 7078468
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH187
• Kingdom: Bacteria
• Replicon accession: NC_011658
• Strand: +
• Start bp: 3947766
• End bp: 3948878
• Gene Length: 1113 bp
• Protein Length: 370 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 643452660
• Product: riboflavin biosynthesis protein RibD
• Protein accession: YP_002340173
• Protein GI: 217961603
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0117] Pyrimidine deaminase; [COG1985] Pyrimidine reductase, riboflavin biosynthesis
• TIGRFAM ID: [TIGR00227] riboflavin-specific deaminase C-terminal domain; [TIGR00326] riboflavin biosynthesis protein RibD

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGATC AAGAATATAT GAGGATTGCT CTGCAATTAG CAGAAGGAAC ATCTGGGCAA 
ACAAGTCCAA ATCCTATGGT TGGTGCTGTT GTTGTAAAAG ACGGAAACAT CGTCGGTATG 
GGGGCTCATT TACGTGCTGG TGAAGAACAC GCAGAAGTTC ATGCTCTTCA TATGGCTGGT 
GACAAAGCAA AAGGAGCCAC CGTGTATGTA ACACTTGAAC CGTGTAGCCA TTTTGGAAAA 
ACACCACCTT GCTGTGAATT GCTCATCAAA AAAGAAGTCA AACGGGTTGT AATTGCTACT 
CTTGATTGCA ATCCTCTCGT TTCTGGTAAT GGAAAAAAAA GATTAGAGGA AGCTGGCATC 
GAAGTAACTA CTGGTGTTCT GGAAGAAGAA GCAGTTTTAT TAAATCGCTA CTTTTTTCAC 
TACATGAAAA CGAAACGTCC ATTTGTAACA ATAAAAACAG CGATGAGCTT AGACGGAAAA 
ACAGCAACCG TAACCGGTGA AAGTAAGTGG ATTACAAGTG AAGATGCACG AGCTGATGTT 
CATCAATATC GTCACACACA CGATGCAATT CTTGTTGGAG TGAATACAGT TATAGCTGAT 
AATCCGCATT TAACAACAAG AATTCCTAAC GGAGGGCAAA ATCCTATACG CGTTATTTTA 
GATACCCATT TACGAACGCC ACCATCTTCT CATGTCATAA CAGATAGTTT AGCACCGACA 
TGGATTATAG TTGGTAAGGA TGTAAATCCA GAGAAAATAG CTTCTTATGA ATCTGAAAAT 
ATAGCTATAT TCCAAATGAA AACGAAACAG ATTGAAATAC AGGATGTTTT ACACCTACTC 
GGCGAAAAAC AAATTCTTTC TCTTTTCGTC GAAGGTGGTC AAACCGTTCA TGCAAGTTTC 
TTACAAACAA AGTATTTCAA TGAAATTGTA ACTTATATAA GCCCAAAATT AATTGGTGGA 
AAAAATGCCC CTACTTTATT TGGCGGCAAT GGTTTTTCAA CATTACAAGA TGCACTTTCC 
TTGGAAATTC AAGAGATGAA ACAAGTTGGC GATGACATAA AAATTGTTGC GCATGCCCGA 
AGTGAGGTGA TGGAATGTTT ACAGGAATTG TAG 

 

Protein sequence

MTDQEYMRIA LQLAEGTSGQ TSPNPMVGAV VVKDGNIVGM GAHLRAGEEH AEVHALHMAG 
DKAKGATVYV TLEPCSHFGK TPPCCELLIK KEVKRVVIAT LDCNPLVSGN GKKRLEEAGI 
EVTTGVLEEE AVLLNRYFFH YMKTKRPFVT IKTAMSLDGK TATVTGESKW ITSEDARADV 
HQYRHTHDAI LVGVNTVIAD NPHLTTRIPN GGQNPIRVIL DTHLRTPPSS HVITDSLAPT 
WIIVGKDVNP EKIASYESEN IAIFQMKTKQ IEIQDVLHLL GEKQILSLFV EGGQTVHASF 
LQTKYFNEIV TYISPKLIGG KNAPTLFGGN GFSTLQDALS LEIQEMKQVG DDIKIVAHAR 
SEVMECLQEL