| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3212 |
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| Symbol | rhaD |
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| ID | 7077926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cereus AH187 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011658 |
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| Strand | - |
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| Start bp | 2983808 |
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| End bp | 2985877 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 643451654 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_002339161 |
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| Protein GI | 217960597 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAACA GTTTATGGAA TGAAACAAAG GCATCACAAT TATCGCAAGG AGTAGACGAA
TTAGTATATC GTTCAAATGT AATTGGAACA GACCGTGCTG TATGTAATTG GGGAGGCGGA
AACACATCGG TAAAGACATT TGAAAAAGAT TTCCGCGGCC GCAATATAGA AGTGATGTGG
GTTAAGGGAA GTGGATCCGA TTTAGCAACG ATGAAAGCAC AAAATTTTAC AGGTTTAAGA
ATGGAAGACA TTCGCTTATT AATGGAGCGT GAAGAAATGT CAGATGAAGA AATGGTAGAG
TATTTAGCTC ATTGTATGAT TGACAGTAAG CATCCACGTG CATCTATCGA AACATTATTA
CACGCATTTT TACCGTTTAA ACATGTGGAT CATACACATC CAGATGCCAT TATTAGTCTT
TGCTGCGCAC ATAATGGAAG ACAAATTGCG GAGGAGATTT ACGGCAATCG TTTCGTTTGG
GTTCCGTATG TGCGTCCTGG ATTTACGTTA TCTAAAATGA TTGCAGAAGG TGTGAAAAAT
AATCCAAATG CTGAACTCGT GTTAATGGAA AAACATGGCC TAGTCGTTTG GGGAGATACG
GCGAAGGAAA GCTATGAAAG AACAATTGCA GTTATTAATG AGGCAGAACA ATACATCAAT
GAACGAGTGA ATGAAAATAC TGTATTCGGA GGTGAAAAAT ACGAAACACT CTCAGTAGAA
GAGCGTAGAA GCATTCTTGC AAAAGTAATG CCGATTATTC GCGGGGCAGT TAGCGACGAA
AAGAAAATGT TATTATCTTA TGATGATACA GATGAAGTAC TTCAATTTGT AAACAGCCAC
GATGCACGAG AGCTTTCGCA AGTTGGAGCA GCTTGTCCGG ATCATTTAGT TCATACAAAG
CGCAGTCCTC TTTATATTGA TTGGGATCCG CAAACAAAAA ACGTAGACGG ATTAATAGAG
AGTATTAAAT CTGGTGTTAC AAACTTTAAA GATGAGTATA AAGCTTACTT TGAACGTAAC
AAATACGAAG GAGACAAAAT GTTTGAATCT GCACCTCGCG TTATTTTAAT TCCTGGTATC
GGTATGGTGA ATACCGGTAA AAATGTGGCA ATGTCAAAAG TAAGTGGTGC GCTGTATCAT
AGGGCAATTT CGGTAATGAA AGGTGCTACA ACGCTCGGAC GTTTCGTTTC TTTAAATGAA
AATGAATCTT ACAATGTGGA GTACTGGCCG CTAGAGCTGT ATAAATTATC GTTAGCACCG
GCTGAAGCGG AATTTTCTCG CAAAGTTGTT TTTATTACAG GTGGTGCTGG CGGAATTGGA
AGTGAAACGG GACGCTGCCT CGTTTCAGAA GGTGCGCATG TCGTGCTTGC TGACTTGAAT
TTTGAAGGGG CAGAAAAAGT TGCGGCTGAA ATTAACGAGA AGTACGGCGA AGGTCGCGCT
ACTGCTGTGA AAATGGATGT AACAAAAGAA GAAGAAGTAA AGGCGGCATT TGAAAAGGCA
GCTCTTACTT ACGGAGGCGT TGATAGTATC GTGAATAATG CAGGACTTGC GACGTCTAGT
CCATTTGATG AAACGACACT TCAAGAATGG AATTTAAATA TGAACGTACT TGGAACAGGC
TACTTTTTAG TGGCACGTGA AGCGTTCAAG CAAATGAAAC AGCAAGGCAT TGGCGGGAAT
ATGGTATTTG TCGGCTCGAA AAATTCTGTA TATGCCGGAA AAAATGCTTC GGCATACAGT
TCTGTAAAAG CACTCGAAAC GCATTTAGCG AGATGTATTG CAGCTGAAGG CGGTGAGTAT
GGCATACGTG TAAATTCAGT TCTTCCCGAT GCGGTGTTGC AAGGATCAGC TATTTGGGGT
TCAAAGTGGC GCGAAGAACG TGCCGCAGCA TATGGTATCG AACCTGATCA ATTAGAGGAA
CATTACCGTA AACGTACAAC ATTATTAGTT AATATTTATT CGAGGGATAT TGCTGAATCG
ATTGCTTTCT TTGCCTCCTC AAAGGCAGAT AAAACAACGG GATGTATGAT TACAGTTGAT
GGTGGTGTAA CAGCAGCATT TACTAGATAA
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| Protein sequence | MVNSLWNETK ASQLSQGVDE LVYRSNVIGT DRAVCNWGGG NTSVKTFEKD FRGRNIEVMW
VKGSGSDLAT MKAQNFTGLR MEDIRLLMER EEMSDEEMVE YLAHCMIDSK HPRASIETLL
HAFLPFKHVD HTHPDAIISL CCAHNGRQIA EEIYGNRFVW VPYVRPGFTL SKMIAEGVKN
NPNAELVLME KHGLVVWGDT AKESYERTIA VINEAEQYIN ERVNENTVFG GEKYETLSVE
ERRSILAKVM PIIRGAVSDE KKMLLSYDDT DEVLQFVNSH DARELSQVGA ACPDHLVHTK
RSPLYIDWDP QTKNVDGLIE SIKSGVTNFK DEYKAYFERN KYEGDKMFES APRVILIPGI
GMVNTGKNVA MSKVSGALYH RAISVMKGAT TLGRFVSLNE NESYNVEYWP LELYKLSLAP
AEAEFSRKVV FITGGAGGIG SETGRCLVSE GAHVVLADLN FEGAEKVAAE INEKYGEGRA
TAVKMDVTKE EEVKAAFEKA ALTYGGVDSI VNNAGLATSS PFDETTLQEW NLNMNVLGTG
YFLVAREAFK QMKQQGIGGN MVFVGSKNSV YAGKNASAYS SVKALETHLA RCIAAEGGEY
GIRVNSVLPD AVLQGSAIWG SKWREERAAA YGIEPDQLEE HYRKRTTLLV NIYSRDIAES
IAFFASSKAD KTTGCMITVD GGVTAAFTR
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