| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A1704 |
|---|
| Symbol | birA |
|---|
| ID | 7078229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 1575231 |
|---|
| End bp | 1576211 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643450175 |
|---|
| Product | biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase |
|---|
| Protein accession | YP_002337666 |
|---|
| Protein GI | 217959118 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0104372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCTA CTATAAGAAA GCAGTTATTG CAAGTTTTTT CGGAAGCGGA TGGCGAGTTT
GTATCTGGTC AAACGATTAG TGATAAACTT GGTTGCTCAA GAACTGCTGT GTGGAAACAT
ATGGAGGACC TTCGGAATGA GGGATATGAA CTTGAAGCTG TGCGTCGATT AGGTTATCGA
ATTGCAAGTA AGCCAGACAA AGTGACTGCG AATGAAATAC AGTTAGGGTT ACAAACGAAA
CATATTGGTA GAACAGTGTA TTTTGAAGAG TCCGTTGAAT CGACGCAACA TATTGCAGCA
AAGCTTGCTT ATGAAGGTGC AGAAGAAGGA ACAATTGTTG TGGCAGAAGA ACAAACAGCG
GGTAGAGGTC GTTTAAGCAG AAAATGGCAT TCACCAAAAG GAACAGGAAT TTGGATGAGT
ATTATTTTAC GTCCATCAAT CCCGGTTCAA CATGCACCAC AACTTACTTT ATTAGCCGCT
GTTAGCGTTG CGCAAGCAAT TGAAAAGTTC ACAGGTGTAA ACGTAGGAAT AAAATGGCCG
AATGATATTT TAATTCAAGG GAAAAAGGCT GTAGGAATAT TAACAGAAAT GCAAGCTGAT
CCTGATAAAA TTAATGCTGT CATTATGGGT ATTGGTATTA ATGCGAATCA AAAGCAAGAA
CATTTTGATG AGGAAATTCA GCATATTGCT ACTTCTTTAG CGATTGAATC TGGTAAGCCA
ATTGTTCGTG CGGAGCTTAT GCAACAAATC TTTTTACAAC TAGAAAAATT GTATGAAGAG
TATTTACAAA ATGGTTTCTC TGTCATTAAA ATTCTTTGGG AAAGTTACGC TGTAAGCATC
GGGAAAGAAA TTAACGCTCG AACGATGAGA GAGACAATTA CAGGGATAGC AAAAGGAATT
ACAGAGGATG GTGTATTGCT CCTAGAAGAC CATGAAGGAA AAGTACATCA TATTCATTCT
GCGGATATCG AAATTAAGTA A
|
|---|
| Protein sequence | MQSTIRKQLL QVFSEADGEF VSGQTISDKL GCSRTAVWKH MEDLRNEGYE LEAVRRLGYR
IASKPDKVTA NEIQLGLQTK HIGRTVYFEE SVESTQHIAA KLAYEGAEEG TIVVAEEQTA
GRGRLSRKWH SPKGTGIWMS IILRPSIPVQ HAPQLTLLAA VSVAQAIEKF TGVNVGIKWP
NDILIQGKKA VGILTEMQAD PDKINAVIMG IGINANQKQE HFDEEIQHIA TSLAIESGKP
IVRAELMQQI FLQLEKLYEE YLQNGFSVIK ILWESYAVSI GKEINARTMR ETITGIAKGI
TEDGVLLLED HEGKVHHIHS ADIEIK
|
|---|
| |