Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A1579 |
Symbol | lysA |
ID | 7077023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | + |
Start bp | 1466223 |
End bp | 1467539 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643450053 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_002337544 |
Protein GI | 217958996 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.111116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTATTTAC ACGGCACAAG CCGAATCAAT GGGCAAGGAC ACTTAGAAAT TGGAGGGTGC GACACGACGC AGCTAGCAAA ACAATATGGA ACACCACTTT ATGTATACGA TGAAGAGTCA ATTCGAGGAA AGTGCCGCGC GTTTCATCGT GCTTTTAAAG AAAGTGGGTT CTCTTATCAA GTAGCATATG CAAGCAAGGC GTTCTTGTGC ATGGAGATGT GCCGAGTAGC TCGTGAAGAG AATATGTCAT TAGATGTTGT TTCTGGAGGA GAATTATATA CTGCACTACA AGCAGGATTT CCTGCATCGC GCATTCATTT TCATGGCAAT AACAAAACAG ATGAAGAAAT TGTGATGGCT CTTCAGGCGA ATATTGGTTG TTTTGTCGTA GATAACTTCT TAGAATTAGA AATTTTGCAT GATTTAGCAG TGCAACATGG GAAATTTGTG AACATATTAA TTCGTGTAAC GCCCGGAGTA GAGGCGCACA CACATGAATA TATTACAACA GGTCAAGATG ATTCAAAATT TGGATTTGGC GTGTCAAATG GTCAAGCGAT GCAGGCAATT GAGCTTGCTT TACAAAAATC AAATTATAAC GTGTTAGGAA TTCATTCACA TATCGGATCA CAAATATTTG AAACGGCTGG CTTTGTGCGA GCGATTGAAG TTCTTCGTCA ATTTTTAGAA GCAGTGAGAG AGCGAACAAA CTATGTAGTA AAAGTGCTAA ATGTAGGGGG AGGATTCGGA ATACGCTACA CAGAGTCCGA TACACCATTA ACTCTTGAGA CGTATGTGCG AGCTGTAACA AGTGCGGTGA GAGAACAATT TACGTTATGT AATTATCCAT TGCCAGAAAT ATGGGTTGAA CCAGGCCGTA GCATTGTAGG TGATGCTGGA ACGACACTTT ATACAGTCGG ATCTGTGAAG GACATTCCGG GTATTCGGAA ATATGTATCA GTGGATGGTG GGATGACTGA TAATTTAAGA CCTGCTTTAT ATAACGCTCG TTATGAAGCG ATGTTAGCGA ATCGAGGGAA TGATGAGAAC GAGGAAGTTG TTTCGATTGC AGGGAAATGC TGTGAGAGTG GAGATATGTT AATTTGGGAT ATTACTTTAC CGAAAGTTGC CTCTGCCGAT TTACTAGCGA TTTCTTGTAC AGGGGCATAC GGGTACTCGA TGGCGAATAA TTATAATCGG ATTCGTAGAC CAGCTGTCGT CTTCGTGAAA GGCGGTACAT CACAAATTGT TGTAGAGCGC GAAACATATG AAAATATTAT TGGGAACGAT CGCATACGTA TTAAAGAACT TGTTTAA
|
Protein sequence | MYLHGTSRIN GQGHLEIGGC DTTQLAKQYG TPLYVYDEES IRGKCRAFHR AFKESGFSYQ VAYASKAFLC MEMCRVAREE NMSLDVVSGG ELYTALQAGF PASRIHFHGN NKTDEEIVMA LQANIGCFVV DNFLELEILH DLAVQHGKFV NILIRVTPGV EAHTHEYITT GQDDSKFGFG VSNGQAMQAI ELALQKSNYN VLGIHSHIGS QIFETAGFVR AIEVLRQFLE AVRERTNYVV KVLNVGGGFG IRYTESDTPL TLETYVRAVT SAVREQFTLC NYPLPEIWVE PGRSIVGDAG TTLYTVGSVK DIPGIRKYVS VDGGMTDNLR PALYNARYEA MLANRGNDEN EEVVSIAGKC CESGDMLIWD ITLPKVASAD LLAISCTGAY GYSMANNYNR IRRPAVVFVK GGTSQIVVER ETYENIIGND RIRIKELV
|
| |