| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A0884 |
|---|
| Symbol | thiO |
|---|
| ID | 7077403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 824952 |
|---|
| End bp | 826061 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 643449369 |
|---|
| Product | glycine oxidase ThiO |
|---|
| Protein accession | YP_002336861 |
|---|
| Protein GI | 217958313 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00117191 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTAAGA AGTATGATGT AGCGATAATT GGCGGTGGTG TAATTGGTAG TTCAGTTGCA
CATTTTCTAG CAGAAAGAGG CCATAAAGTA GCGATTGTAG AGAAGCAACA GATTGCATCT
GAAGCCTCGA AAGCAGCCGC TGGTTTACTT GGGGTGCAGG CAGAATGGGA TGAATATGAC
CCGCTATTTG AACTTGCGAG AGAAAGCCGT GCTATATTTC CACAACTTGC AGAAGTTTTA
CGCGAAAAAA CAGGCATCGA TATTGGGTAT GAAGAGAAAG GCATTTATCG CATTGCTCAA
AATGAAGATG AGAAGGAAAG AATTCTTCAC ATTATGGATT GGCAGCAGAA AACCGGTGAA
GATTCTTATT TCCTAGCGGG AGATCGTTTG CGAGAGAAAG AGCCGTATCT ATCTGAGTCA
ATTATAGGGG CTGTATATTA TCCGAAAGAT GGTCATGTTA TTGCACCAGA GCTTACGAAA
GCATTCGCAC ATTCCGCATC ATTCTCGGGT GCTGATATAT ATGAGCAAAC AGAAGTATTT
GATATCCGTA TTGAAAATAA TAAAGTGACT GGAATTGTGA CAAGCGAAGG TATGATCACT
TGCGAAAAAG TTGTTATTGC GGGTGGCTCA TGGAGCACAA AGTTACTAGG TTATTTTCAC
CGCGAATGGG GTACATATCC AGTTAAAGGA GAAGTAGTAG CGGTCAGAAG TAGAAAACCA
CTTTTAAAGG CGCCTATTTT CCAAGAAAGA TTTTACATTG CACCAAAGCG CGGCGGACGT
TACGTAATTG GAGCAACGAT GAAGCCCCGT ACATTCAATA AAACTGTGCA ACCAGAGAGT
ATTACTTCTA TATTAGAGCG CGCGTATACA ATATTGCCAG CATTAAAAGA AGCGGAATGG
GAAAGCGCAT GGGCAGGATT AAGACCACAG TCGAATCATG AAGCTCCTTA TATGGGAGAG
CATGAAGAAA TAAAAGGTTT ATATGCTTGC ACAGGCCATT ATCGAAACGG CATTTTATTA
AGTCCTGTTT CTGGTCAATA TATGGCTGAT TTAATAGAAG GAAAGCAGGA GAATCACTTG
CTAGATTCAT TGCTTTCTAA AACAGTTTAG
|
|---|
| Protein sequence | MCKKYDVAII GGGVIGSSVA HFLAERGHKV AIVEKQQIAS EASKAAAGLL GVQAEWDEYD
PLFELARESR AIFPQLAEVL REKTGIDIGY EEKGIYRIAQ NEDEKERILH IMDWQQKTGE
DSYFLAGDRL REKEPYLSES IIGAVYYPKD GHVIAPELTK AFAHSASFSG ADIYEQTEVF
DIRIENNKVT GIVTSEGMIT CEKVVIAGGS WSTKLLGYFH REWGTYPVKG EVVAVRSRKP
LLKAPIFQER FYIAPKRGGR YVIGATMKPR TFNKTVQPES ITSILERAYT ILPALKEAEW
ESAWAGLRPQ SNHEAPYMGE HEEIKGLYAC TGHYRNGILL SPVSGQYMAD LIEGKQENHL
LDSLLSKTV
|
|---|
| |