| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A0761 |
|---|
| Symbol | treC |
|---|
| ID | 7075738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 715280 |
|---|
| End bp | 716941 |
|---|
| Gene Length | 1662 bp |
|---|
| Protein Length | 553 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643449254 |
|---|
| Product | alpha,alpha-phosphotrehalase |
|---|
| Protein accession | YP_002336764 |
|---|
| Protein GI | 217958220 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGATT GGCATAAAAG TGTAGTTTAT CAAATTTATC CGAAGAGCTT TAATAGCTAT
TACAATAAAG AAACCGGTGA TATAAAAGGG GTTACAGAAA AACTAGATTA CTTAAAAGAA
CTCGGAGTAG ATTATATTTG GTTAACACCG ATATACCAAT CGCCACAAAA TGATAATGGA
TACGATGTAA GTGATTACTA CAATATTGAT CCATCTTACG GAACGATGGA AGAGTTTGAA
GAGCTTTTAG AAGAAGCGAA AGCACGTAAC ATTGAAATTA TGCTTGATAT CGTTGTAAAT
CATAGTTCGA CGGAGCATAA GTGGTTTAAA GAAGCGAAGG AAGATAAAAA CAGTCCATAT
CGTAATTACT ATATTTGGCG TGATGAAAAA AATAATTGGC AATCTAAGTT TGGTGGGTCT
GCTTGGAAAT ATGATGAAAA GACAGAGCAA TATTATTTAC ATCTATTTGA TGAGACACAA
GCGGATTTAA ACTGGGAAAA TGAAAAACTT CGTGAAGAAG TATATGATAT GATGCGCTTT
TGGCTTGATA AAGGGGTAAC TGGATTCCGA TTAGATGTTA TTAATTTAAT TTCAAAAGAT
CAACAGTTCT TAAATGATGA CGGAAGTACG GCGACAAGTG ATGGCCGTAA ATATTATACA
GATGGCCCGC GTGTTCATGA ATATTTACAA GAAATGAACC GAAATGTTTT TGAAGGGAAA
GATGTAATTA CAGTTGGAGA AATGTCATCT ACGACAATTG ATAATTGTAT TAAATATTCA
AACCCTGAGC GTAATGAATT AAGTATGACG TTTAGTTTCC ATCATTTAAA AGTAGATTAT
CCGAATGGAG ATAAGTGGAC GAAAGCGAAT TTTGATTTCA TTAAATTAAA AGAGATTATG
TCTAATTGGC AAATTGAAAT GCAAAAGGGT GGAGGATGGA ATGCATTATT CTGGTGTAAT
CATGACCAGC CTCGTATTGT GTCACGCTTT GGTGATGATA GAGAGTACCG AAATGAATCT
GCGAAAATGT TAGCGACAGC GATGCATATG TTGCAGGGTA CACCTTATAT TTATCAAGGT
GAGGAAATCG GTATGACGAA TCCTAAATTC GAGTCTATTG AGCAATATCG CGATGTTGAA
TCGTTAAATA TATATGATAT AAAGCTGGAA GAAGGATTAT CAAAAGAAGA GATTATCGGG
ATTTTAAAAC AAAAATCTCG TGACAACTCC CGTACTCCAA TGCAGTGGAA TGAAGAGATG
AACAGTGGCT TTACAACAAG TACACCTTGG ATTTCAGTGG CTGAAAACTT TAAAGAAATA
AACGTAGAGA AGGCATTAGA AGATAAAGAG TCTGTATTTT ATCATTATAA AAAGTTAATA
GAACTTAGAA AAACGTATGA TGTAATTACA GAAGGAGAAT ATGCTATTTT GGATAAAAAT
GATCCTAAGA TTTGGGCATA TACTCGTACT ACAGAAAGTG AAGTGCTGCT TGTTATAAAT
AACTTCTATG GAGAAGAAAT AACGTACTCT GTACCAGCGC ACGTTCAATT AGATGGAATG
AAACAAGAAA TACTACTGTC GAATTATACA GATGCTAGCA AGGATATTAC AAAACTTAAC
TTAAGACCAT ATGAATCAAT TGTTTATCGA TATACGAAAT AA
|
|---|
| Protein sequence | MKDWHKSVVY QIYPKSFNSY YNKETGDIKG VTEKLDYLKE LGVDYIWLTP IYQSPQNDNG
YDVSDYYNID PSYGTMEEFE ELLEEAKARN IEIMLDIVVN HSSTEHKWFK EAKEDKNSPY
RNYYIWRDEK NNWQSKFGGS AWKYDEKTEQ YYLHLFDETQ ADLNWENEKL REEVYDMMRF
WLDKGVTGFR LDVINLISKD QQFLNDDGST ATSDGRKYYT DGPRVHEYLQ EMNRNVFEGK
DVITVGEMSS TTIDNCIKYS NPERNELSMT FSFHHLKVDY PNGDKWTKAN FDFIKLKEIM
SNWQIEMQKG GGWNALFWCN HDQPRIVSRF GDDREYRNES AKMLATAMHM LQGTPYIYQG
EEIGMTNPKF ESIEQYRDVE SLNIYDIKLE EGLSKEEIIG ILKQKSRDNS RTPMQWNEEM
NSGFTTSTPW ISVAENFKEI NVEKALEDKE SVFYHYKKLI ELRKTYDVIT EGEYAILDKN
DPKIWAYTRT TESEVLLVIN NFYGEEITYS VPAHVQLDGM KQEILLSNYT DASKDITKLN
LRPYESIVYR YTK
|
|---|
| |