| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0254 |
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| Symbol | avhB5 |
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| ID | 5148671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 186282 |
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| End bp | 187004 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640539131 |
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| Product | Type IV secretory pathway AvhB5 protein |
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| Protein accession | YP_001220564 |
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| Protein GI | 148241063 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02791] P-type DNA transfer protein VirB5 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGTTC AACGTATGCC GGGGATTCTC CCGTTCGTGC CGGTCATGAT CTTCCTGATG
GCATCACCTG CAGGAGCGGA GATTGTGTTC GATCCTAGCG TCTATGCGCG GCAATTTGAG
CAACTGACGG AGCTGAAGAA GCAGGTCGAT ACCCTGACGT CCCAGCTCAA GGTGGCGCAA
GATCAATTGA ACCAGGCCAA GCAGCTCTAT GACAGCTTCA ACAAGCGGAC CAACGCCAAC
GACATCGGCG CGCTGCTAAA CACGCCCCAG TTCCGGAAAG TCCTGCCCCA ACAGTTCTCT
GACATCGAAC GTCTCGTGGC GGGGCAGGGT GGCGGCAACT TCGCCGACGC GATGAACCAG
TACCTTTCGC AGAACCGCGC GTATGCCGGC AACAGCGGCA ATTCGTATTA CCAGAGCGAG
CTCGACCGGA TCGCGCGGCA GACCGGCGCC AAGCACTCCA TGGGCCAGGC GGTCTACGAC
ACCGCCTCGC AGCGTATCGA TGCGCTCGAA GAATTGAGAA CCCGCATCAG CTCTGCGACC
GACGTCAAGG AGACTCTCGA TTTGTCAGCG CGGCTGCAGG CCGAACAGGC GCTGCTGCAG
AACGATGTGC TCCGGATGCA GGGTCTTGCG ATGATCCAGC AGGCCCGCAC CGACATGGAC
GGACAGCGGG AGCGCGAAAA ACAACAACAA CTGATTGATG AAATGAAGGC GGCGCTGGAA
TGA
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| Protein sequence | MTVQRMPGIL PFVPVMIFLM ASPAGAEIVF DPSVYARQFE QLTELKKQVD TLTSQLKVAQ
DQLNQAKQLY DSFNKRTNAN DIGALLNTPQ FRKVLPQQFS DIERLVAGQG GGNFADAMNQ
YLSQNRAYAG NSGNSYYQSE LDRIARQTGA KHSMGQAVYD TASQRIDALE ELRTRISSAT
DVKETLDLSA RLQAEQALLQ NDVLRMQGLA MIQQARTDMD GQREREKQQQ LIDEMKAALE
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