Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_p0179 |
Symbol | hupL |
ID | 5148542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009475 |
Strand | - |
Start bp | 134030 |
End bp | 135742 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640539078 |
Product | uptake hydrogenase large subunit |
Protein accession | YP_001220511 |
Protein GI | 148241010 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGATC CGGTCACGCG TATCGAAGGC CATCTCCGCA TCGAGGCGGA GACGGATGCG CAGGGCAACA TCACTCGAGC ATCGAGCTCC GGGACGATGG TTCGCGGCAT CGAAGTGATC CTGAAGGGGC GTGATCCGCG GGATGCTTGG GCATTTACGC AGCGGTTCTG CGGCGTGTGC ACGGTCGTAC ACAGCATCGC CTCGGTACGC GCGGTCGAAT ATGCCCTCGG TTACGTCATC CCGCAGAACG CGCAGCACAT TCGAAATCTC ATGATCGCCG CGCAGTTCGT ACACGACCAC GTCATGCACT TCTACCATCT ACATGCTCTG GACTGGGTCG ACATCGTTTC GGCGCTGAAG GCGGATCCGG CAGCCACCGC GAAGCTTCAG ACCACCCTAA GCGCATGGCC GAACAATTCC GCCGAATATT TTCGGAGCAC CCAACAGAAG CTCAAGGGCT TCGTGGAAGG CGGTCAGCTC GGCATCTTTA CCAACGGCTA TTGGGGGCAT CCGGCATACA AGCTGCCGCC CGAGGTCAAT CTGCTCGCCG TAACGCACTA TCTGGAAGCG CTTGCCTGGC AGCGCGATGT CGTGAAGATT CACGCCATAT TCGGTGGCAA GAACCCGCAT CCTAATTTCG TGGTCGGCGG CGCACCCTGC GCGATCTCGG AGACGGCGCA CGCGACCGCG GTGACACCCG ACAACCTGCG TTTTGTCGGA GAGATGATCG GCAAGATGCG GTCCTTCGTC GATCAAGTGT ATTTGCCCGA CACGCTTGCG ATCGCCGGTT ACTATAAGGA CTGGGCAAGC CGAGGGGAGG GTGTCGGCAA TTTCCTGTCG TTCGGCGAGT TCCCGCGAGG CGTCGGTGCG GCGGAACGGA CCACCCTACG TATCCCGCCA GGCGTAATTC TGAACCGCGA CCTGTCGAAG GTGATGTCGG TGGATTTCGA GGATCCGACC GAGATCCAGG AGTTCGTCGC ACATTCCTGG TACGATTATA GTGCGGGCAA GCAGACTGGC CTCCACCCCT ACGATGGCGA AACCAACCTC AACTACACCG GCCCGACGCC GCCCTACGAG CAGCTCGACG TCGACCAGTC ATATTCCTGG ATCAAGTCGC CGCGCTGGAA GGGATTGCCG ATGGAAGTGG GGCCCCTCGC ACGCGTGCTG ATCTTGTACG CGAGCGGCGA CCGGGCAACC CGCGGTCTCG TCGATCACAG CCTGGGCCGG CTGGACCTGC CGGTCTCAGC TCTCTTTTCG ACGCTTGGCC GCATCGCCGC CCGGACGCTG GAAACAAAAT TGATCGCCGA CGAAATGAGC GGGATGTACG ATGCACTGAT TGCCAGGATT GCGAGCGGCG ATCTCGCGAC CTTCAACGAT CTTCTGTTCG ACCCCTCGAC TTGGCCGAAG CAGGCGCGCG GCGTCGGCGT GATGGAAGCG CCACGCGGCG CACTCGCCCA TTGGGTGACC ATCGAGGATC GGCGAATCGC TAACTATCAG GCGGTAGTAC CCAGCACCTG GAATGCCGGC CCGCGCGACA CGGCGGGGCG CGAAGGTCCG TATGAGGCGG CGCTACGCGG ACATCGGCTC CACGATCCCG CAAAACCGAT CGAAATCCTT CGCACCATCC ATAGCTTCGA TCCTTGCCTT GCCTGTGCCG TCCACGTCGT CGATCCGCAT GGCGAAGAGT TGGTACGGGT AAACGTGCTA TGA
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Protein sequence | MVDPVTRIEG HLRIEAETDA QGNITRASSS GTMVRGIEVI LKGRDPRDAW AFTQRFCGVC TVVHSIASVR AVEYALGYVI PQNAQHIRNL MIAAQFVHDH VMHFYHLHAL DWVDIVSALK ADPAATAKLQ TTLSAWPNNS AEYFRSTQQK LKGFVEGGQL GIFTNGYWGH PAYKLPPEVN LLAVTHYLEA LAWQRDVVKI HAIFGGKNPH PNFVVGGAPC AISETAHATA VTPDNLRFVG EMIGKMRSFV DQVYLPDTLA IAGYYKDWAS RGEGVGNFLS FGEFPRGVGA AERTTLRIPP GVILNRDLSK VMSVDFEDPT EIQEFVAHSW YDYSAGKQTG LHPYDGETNL NYTGPTPPYE QLDVDQSYSW IKSPRWKGLP MEVGPLARVL ILYASGDRAT RGLVDHSLGR LDLPVSALFS TLGRIAARTL ETKLIADEMS GMYDALIARI ASGDLATFND LLFDPSTWPK QARGVGVMEA PRGALAHWVT IEDRRIANYQ AVVPSTWNAG PRDTAGREGP YEAALRGHRL HDPAKPIEIL RTIHSFDPCL ACAVHVVDPH GEELVRVNVL
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