| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0054 |
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| Symbol | aapM |
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| ID | 5148648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | + |
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| Start bp | 36305 |
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| End bp | 37387 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640538981 |
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| Product | inner membrane amino-acid ABC transporter permease protein |
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| Protein accession | YP_001220414 |
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| Protein GI | 148240913 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGACGA TTTCGCTCCC TTTGCCTGAG GCTCCGGTGC CGTCCCAGGC CTCGCTGCGC
CAGGCCGCCA GGCTGCTGTT CGGCTCGCCG CTGAATGCCG CCCTGACGCT CGCATTCGGC
GCGATGCTCG CCGTCGCCCT GCCGCCGATG TTGCGCTGGC TGGTGCTCGA CGCCGTCCTC
TTCAATCCGG ACCCGGCCGC CTGCCGGGCC GCGTCCGGAG CCTGTTGGAG CTTCATCTAC
GTCAAATCGG GCCAGCTGCT GTTCGGCATC TACCCGGTCG AGGAGCGCTG GCGGCCGGCT
CTGGTCTGCC TACTGATCCT GGCCTTGCTC GGCTGGTCGG TGCGGCCGGC GAGCTGGACG
CCGCGTCTGC TCGGCCTCTG GATCTCGGCG CTTGCGCTGA TCGTCTGGAT GATGGGCGGC
GGCCTCGGAC TCGAAGAGGT CCCGACCTCG GCCTGGGGCG GCTTGCCGGT GACGCTGATC
CTCACTGTGG TCGCAATCGG GATCGCTTTC CCCGTCGGCA TCCTGCTCGC CTTGGCCCGC
CGGTCGACGA TGCCGGCTGT CCGGATCGCA GCCGTCGTCA CGATCGAGTC CGTCCGCGGC
TTGCCCCTCC TCTCGATCCT GTTCGTCGCC TCGATCATGC TGCCGCTCTT CCTCCCAGAG
GCGCTGCTCC CCGACAAGTT CGTGCGCGCC CTCGTCGCCC TGACGATTTT CGCAGCGGCC
TATCTCGCCG AAGTTATCCG CGGCGGACTG CAGGCGATCC CGAGGGGCCA GTACGAGGCC
GCCGCGGCGC TTGGCCTGCC GTTCTGGCGC ACGCAGTACC GCGTCATCCT ACCGCAAGCG
ATCAGAGTAG TGATCCCGGC CTTGGCGAAC ACGATCATCG TGATGATCAA GAACACCAGC
CTCGTGCTCG TTGTCGGGCT CTTCGACCTG ATCAGCTCGG GTAAGGCCGC TCTGGCCGAT
CCGGCGTGGC CGTCGCCGGC CGCCGAGACC TTCCTGTTCA TCGGCGGGAT CTTCTTCGCC
CTGTCCTTCT CATTCGCCCG CTTCGCCGAT TTTCTGGAGC GGCGCAGCCC CGTTGCTCGC
TAG
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| Protein sequence | MKTISLPLPE APVPSQASLR QAARLLFGSP LNAALTLAFG AMLAVALPPM LRWLVLDAVL
FNPDPAACRA ASGACWSFIY VKSGQLLFGI YPVEERWRPA LVCLLILALL GWSVRPASWT
PRLLGLWISA LALIVWMMGG GLGLEEVPTS AWGGLPVTLI LTVVAIGIAF PVGILLALAR
RSTMPAVRIA AVVTIESVRG LPLLSILFVA SIMLPLFLPE ALLPDKFVRA LVALTIFAAA
YLAEVIRGGL QAIPRGQYEA AAALGLPFWR TQYRVILPQA IRVVIPALAN TIIVMIKNTS
LVLVVGLFDL ISSGKAALAD PAWPSPAAET FLFIGGIFFA LSFSFARFAD FLERRSPVAR
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