Gene BBta_7871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7871 
Symbol 
ID5152166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8261053 
End bp8261769 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID640562495 
Producthypothetical protein 
Protein accessionYP_001243602 
Protein GI148259017 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGCGT TTTTCGTTCC AGTCATTGCC GCCTTTTCCG CGATCCTGCT GTCGGGCTGT 
ATGCACACGG CTTCCCCCGT CGCCGTCGGC CAGCCGCACA GTGATCTCGA TGCAATGGCC
TATGGGATGC CTTCCTCCGA CCCGGTTGCC GCCACCGGGC AGGGTGGGGC CATCCCGGCG
CTGCGCAACG CGTTCGCCGC CGCCCCGCGC GGTGGCGCCT ATGTCATGCC TGCCGGCTAC
ACGCCGCCGC GGTATGATGC TGCGTACCAT CTCGATGCCG GCGACCGGCT GCGCGTCGTT
GTCTACGGCC AGGAGGGGCT CACCAACACC TACGCGATCG ATGCATCCGG CGCGATTACG
ATGCCGCTGA TCGGCAGCGT GCCGGCGCGT GGCCGCACCA CGGCCGGCCT CGCCGCCGAG
ATCGCGGCCA AGCTGCGCAA CGGCTACATT CGTGAACCAT CGGTCGCGGT CGAGATCGAA
GCCTATCGCC CGTTCTTCAT CCTGGGCGAG GTGCAGGCGC CTGGCCAATA TCCCTACGTT
CCCAACATGA CGGTGGAGAG CGCGATCGCG ATCGCCGGCG GCTTCTCGCC GCGCGCGCGA
CGCGACGTGG TCACGCTGAC CCATACCGAT GCGTCAGGCG TGGCCCGCTA CGAGGTGCCG
TTGGGCACCT CGCTCAAGCC CGGCGATACG ATTCAGGTCG GCGAGCGCTG GTTCTGA
 
Protein sequence
MRAFFVPVIA AFSAILLSGC MHTASPVAVG QPHSDLDAMA YGMPSSDPVA ATGQGGAIPA 
LRNAFAAAPR GGAYVMPAGY TPPRYDAAYH LDAGDRLRVV VYGQEGLTNT YAIDASGAIT
MPLIGSVPAR GRTTAGLAAE IAAKLRNGYI REPSVAVEIE AYRPFFILGE VQAPGQYPYV
PNMTVESAIA IAGGFSPRAR RDVVTLTHTD ASGVARYEVP LGTSLKPGDT IQVGERWF