Gene BBta_7839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7839 
SymbolcheA 
ID5151577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8225590 
End bp8227665 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content66% 
IMG OID640562463 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001243570 
Protein GI148258985 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.13544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.422653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC CTGATTGGAC GCAGGCCTTT CGCCTGGAAG CAACCGAGCT TCTCGAGACG 
CTGGAAGGTG CCCTGCTGGA CCTTTGCGAG CGCCCCGACG ATCGTGATCT CGTCGACTCC
GCCTTTCGCG CCCTGCACAC GATCAAAGGA TCGGGCGCGA TGTTCGGCTT CGAACGGGTC
GCGGCCTTCA CGCACGAATT CGAGACCGCT TTCGACAAGG TCCGCAAGGG CGAGATCTCG
CCCACGCGCG AGCTGATCAC GGTGGCCTTG TCGGCCAAGG ACTATATTCG CTCGCTGATC
GAATCGCCCG ACGGGACCGA TGCGATCATC GGCGACGCCA TCCTCGACGA TCTGCGCAAA
TTCGTTGCGC CGGCTGAGCC GCACGAGGCG AGCGCGGTGC CGCCGCCCAG CGCGCCGCCG
GTCGCTGCCG CTGCGGCCGC TGAAAGCGGC GCCGCCGCGG TCGGCTGGCG TCTTCATCTG
GAGTTCGAGT CGCATATCCT GAGGAACGGC TCCAATCCGC TCAACTTCCT CGACGATCTC
AGCAAGCTCG GTCCCTGCTT CGCCGTTGCT CTGACCGACG AGATCCCGCT GCTCGATGCG
CTCGATCCGG AGGAGTGCTA TCTCAAATGG GACGTGACCT TGCATTCGGA CTGCAGCCGA
GAGGTCATCG ACGACATCTT CATGTTCGTC ATCGACGAGA TGGTGCTGTC GGTGACGCCG
CTGGCGCAGT CCGAGCTGCC GGCCGCCGAC CAGCATCCGA CGACGGCGCC AGACGTGAAC
GTCTCCACCG CTCCCGCCGC CACCGCTCCG TCGCGGTCGC CGGCCTCGCA TTCGCCTCCC
TCGATTTCGT CTCCCTCGGA GCCGCGTCGC GACGAGCAGA AGCGCGGTGA CGACCGCGCC
ACCGCGACCG TGCGTGTGCA GGCGCGGCGC CTGGATGAGA TGATGGACCG CGTCGGTGAG
CTCGTCATCG CCCAAGCGCG GCTCAGCCAG CTGGCCGCGA CGAGTTCGGA TCCATCCGTC
AAGCTGATCG CCGAAGAGAT CGAGCGCCTC GCCGGCAGCC TGCGGGATAC GACCATGGGC
GCCCGCATGG TACCGATCGG CTCGGTCTTT GGGCGTTTCC GCCGACTGGT CCACGATCTT
TCGCTGGAGC TGTCGAAGCC GGTCGACCTC GTCACCTCGG GCGAGGACAC CGAGCTCGAC
AAGACCATGA TCGAATGCCT GGCCGATCCT TTGGTGCATC TGATCCGCAA CGCCATCGAC
CACGGCATCG AAGCGACGGC GGCACGCGTG GCCGCCGGCA AGACGGAAAA AGGGCGTATC
GAGCTGCACG CCGTCCATTC CGGCGCGCAG GTTCTGGTCA CGGTTCGCGA CAATGGCGCG
GGTCTCAACA CGGCGCGCAT CCGCGCCAAG GCCGAGGAGC AGGGGCTGAT CGCACCCGGC
GCCGAGCTGC CCGATGCCGA CATCCACCAG TTCATGTTCC ATCCGGGCTT CTCGACGGCG
CAGACCATCT CCGCGCTCTC GGGGCGCGGC GTCGGCATGG ATGTGGTCAA GCGCACGATC
GAGACCATGC GCGGGTCGAT CGATCTCTCG ACCAGGCCGG GCGAGGGTAC GACCGTCACG
CTGCGGCTGC CGCTGACGCT CGCCATCATT GAGGGCCTGC TGATCCGCGT CGGCGAGGCC
CGCTACATCA TCCCGCTGTC GGCCGTGGAA GAGTGCGTCG AGCTGACCGC CGAGGACCAG
CGCGCGCGCG GCCGCCACTT CCTCAACATC CGCGGCGATC TCGTGCCCTA TCTGATGCTG
CGCGACATTC TGCAATCGAC CGTCTCGCCC GACACCTACC AGAAGACGAT CATCGTCTCG
ACCGGCGAGA CCCGCGTCGG GCTGGTTGCC GACCAGATCA TCGGGAACCA TCAGACCGTG
ATCAAGTCGC TGTCGAAGCT GCATTCCGAT GTCACGATCT TCTCCGGCGC CACCATCCTC
GGCGACGGCA CCGCCGCGCT GATCCTCGAC GTCGCCCAGC TCGTGGGGCT CGCCCAGGCC
CATGCCGACA AGCACCATCT GAACGAGGCC GCCTGA
 
Protein sequence
MSKPDWTQAF RLEATELLET LEGALLDLCE RPDDRDLVDS AFRALHTIKG SGAMFGFERV 
AAFTHEFETA FDKVRKGEIS PTRELITVAL SAKDYIRSLI ESPDGTDAII GDAILDDLRK
FVAPAEPHEA SAVPPPSAPP VAAAAAAESG AAAVGWRLHL EFESHILRNG SNPLNFLDDL
SKLGPCFAVA LTDEIPLLDA LDPEECYLKW DVTLHSDCSR EVIDDIFMFV IDEMVLSVTP
LAQSELPAAD QHPTTAPDVN VSTAPAATAP SRSPASHSPP SISSPSEPRR DEQKRGDDRA
TATVRVQARR LDEMMDRVGE LVIAQARLSQ LAATSSDPSV KLIAEEIERL AGSLRDTTMG
ARMVPIGSVF GRFRRLVHDL SLELSKPVDL VTSGEDTELD KTMIECLADP LVHLIRNAID
HGIEATAARV AAGKTEKGRI ELHAVHSGAQ VLVTVRDNGA GLNTARIRAK AEEQGLIAPG
AELPDADIHQ FMFHPGFSTA QTISALSGRG VGMDVVKRTI ETMRGSIDLS TRPGEGTTVT
LRLPLTLAII EGLLIRVGEA RYIIPLSAVE ECVELTAEDQ RARGRHFLNI RGDLVPYLML
RDILQSTVSP DTYQKTIIVS TGETRVGLVA DQIIGNHQTV IKSLSKLHSD VTIFSGATIL
GDGTAALILD VAQLVGLAQA HADKHHLNEA A