Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7638 |
Symbol | |
ID | 5150851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 8031794 |
End bp | 8033299 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640562282 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001243390 |
Protein GI | 148258805 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACGATCT GCGCCATGAC GGCGACGATC ATGCAGGCGC TCGACACCAC CATCGCCAAT GTCGCCTTGC CCTACATGCA AGGCACGCTG TCAGCCTCGA CCGACCAGAT CAACTGGGTG CTGACCTCCT ACATCGTCGC GGCCGCGATC ATGACCGCGC CGGTGGGCTG GATCGCCAAC CGCTTCGGCC GCAAGCGCAC CTTCATCGTC TGCTCGGCCG GCTTCACTAT TGCTTCGGTC ATGTGCGGTC TGGCCCAGGA CATCACCCAG ATGGTGCTGT TCCGCCTGTT GCAGGGCGTG TTCGGTGCCT CGCTGGTGCC GCTGTCGCAG GCCGTGATGC TCGACTCCTA CGCGCTGCAT GAGCGCGCCA AGGCGATGGC GATCTGGGGC ATGGGCGTGA TGCTCGGCCC GATCATGGGG CCCTCGCTGG GCGCCTGGCT GACCGAGACT TATTCCTGGC ATTGGGTGTT CTTCGTCAAC CTGCCGTTCG GCGCCGTGAC CGTGCTCGGC CTGATGGCCT TCATGGAGGA AACCAAGCCG AATGCGGAAC TCACGTTCGA CTGGTTCGGC TTCGTCGCGC TCGCCATCGG CATCGGCTCG CTGCAGATCG CGCTCGATCG CGGCGAGGAT CAAGGCTGGC TCGAGAGCAA CGAGATCATC ATCGAGTTCA TCATTGCCGG CGTCGGCTTC TACTACTTCC TTGCCCATTC GCTGACCACG CAACGGCCGT TCATCCAGTT CGCGCTGTTC AAGGACCGTA ATTTCGTCGG CGGCTGCGTG TTCATGACCG TGATGGGCCT TGTGCTATTC TCGACCATGG CGCTGTCCTC GCCGTATCTG CAGAACGTCA TCGGCTATCC GATCATCACC GCCGGCGTCC TCCTGGCGAC CCGTGGCTGC GGCACGTTGG TCGCAATGAT GCTGGTCGGC CGGCTGTTGC GTTTTATCGA GGCGCGCACC TTGATCGTGG TCGGACTGTC GCTGACGGCG TTGTCGCTGT TCCAGATGAC CGGCTGGACC GACCACACCG GCGTGCCCGA GATCATCACC GTCAGCATCA TGCAGGGCTT TGGCTTCGGC CTGGTGTTCG TGCCGCTGTC GACCGTGGCG TTCCTCACCT TGCCGGGCCA TTTGCGCACG GATGGAACAT CAATGCTGAC TTTGGTGCGC AACGTCGCAA GCTCGATCGG GATCTCGATC GCGATCGCGC AGCTGACGGA AGGAACACGC CGCAGCCACG CGATCCTGGT CGAGCACATC AACCCGTTCA ACCACGCTCT GCAGATGCCG AACGTGGCGG GGCTGCTCAA CCTGTCGACC GATGCCGGAC GCGCGATGGC CGATGCCATG GTCATGATGC AGGCCCAGAT CCTGGCGTTC TCCCACGATT ACCAGCTGGT GATGACGTTC ATCCTGGTGT CGATCCCGCT CGCCGTCATG ATCGGCTCGA CCCGCACCGC GCTCCGCGCC CAGTCCGCAC CGGCGGAGCA CGCTGTGATG GAGTAG
|
Protein sequence | MTICAMTATI MQALDTTIAN VALPYMQGTL SASTDQINWV LTSYIVAAAI MTAPVGWIAN RFGRKRTFIV CSAGFTIASV MCGLAQDITQ MVLFRLLQGV FGASLVPLSQ AVMLDSYALH ERAKAMAIWG MGVMLGPIMG PSLGAWLTET YSWHWVFFVN LPFGAVTVLG LMAFMEETKP NAELTFDWFG FVALAIGIGS LQIALDRGED QGWLESNEII IEFIIAGVGF YYFLAHSLTT QRPFIQFALF KDRNFVGGCV FMTVMGLVLF STMALSSPYL QNVIGYPIIT AGVLLATRGC GTLVAMMLVG RLLRFIEART LIVVGLSLTA LSLFQMTGWT DHTGVPEIIT VSIMQGFGFG LVFVPLSTVA FLTLPGHLRT DGTSMLTLVR NVASSIGISI AIAQLTEGTR RSHAILVEHI NPFNHALQMP NVAGLLNLST DAGRAMADAM VMMQAQILAF SHDYQLVMTF ILVSIPLAVM IGSTRTALRA QSAPAEHAVM E
|
| |