Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7611 |
Symbol | |
ID | 5154546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 8002387 |
End bp | 8004402 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640562255 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001243363 |
Protein GI | 148258778 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.837679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.165016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGATG TGAGGGGCTA TTTCGCTCGC GCTGCGGACT TGTTTCGCGT GCCTCCAGAC CAGCCCGAGC TGACGCGGGC GCAGTTCCAG GCGTTCTCCA AACAGGTGCC GCTGCTCTAT TTCATTCTGA TCACCAACAG TCTCGCCCTC GCTTATACGT TCCTGCCGCT GGCGCCGATA TGGCTGACGA TGGCGGTCCC GGCGCTGCTG TCGGCGCTGA CCGGCTTTCG CATGCTGTGG TGGTTGCGCC AGCGCGATGT CGGAGCCAGC AGCGATCAGA TTCTGCACAA GCTGCGCGTC ACCAATCGAA TCGCCGGGCC GATCGGAGCG TTGTTCGTCG CCTGGTCGTT CGCGCTGTTT CCCTATGGCG ATCCGTTCGC GAAGGGGCAG GTCGCTTTCT ACATGGCCGT CACGGTCATC GGCATCATCT TCTGCCTGAT GCATCTGCGA TCGGCCGCGC TGATCGTCAC GCTCGTGGTG ATCGTGCCCT ATGTGATCTT CTTCATGTCC ACCGGCGTCC ACGCGTTGCG TGCAATTGCA GTCAATCAGC TGCTCGTCTC GTGCGCGATG GTGATCGTGC TCTTTATCTA CTACCGGGAT TTCGCCGCGC TGGTCGCCAG TCGCAAGTCT CTGCTGGCCG AGCAGGCCGC GACCCAGGCG CTGTCGGACG AGAACTTCCG TCTCGCCAAT CTCGATTCGT TGACGGATCT TCCCAATCGC CGTCGCTTCT TCTCGGAGCT TGCGCAAGCC TTCGAGGACG CCGAGCGGGA CGGCACGCGG CTCGCGGTCG GCATCATCGA TCTCGATGGC TTCAAGCCCG TCAACGACAC CTACGGCCAT AGCGTCGGCG ATCGCGTCCT GATCGAGGCT GCGCGCCGGA TCAGCGACGT GTGCGACAGC GTGGGCGACA ACGTGCATCT CGCGCGGCTC GGTGGCGATG AATTCGGACT GATCGTCGCG GGCGATCCGG AGGATGACGA GCTTCTCGCG CTTGGACGAC AAATCACCGA GCGGATCCAG CTGCCCTACG AGCTCGATAC GGCGCATACG GGAGTGTCGT GCTCGACAGG TTTCGCGCTG TATCCTCGCT CCGCGACCGC CGCCGATGCG TTGTACGAAT GCGCCGACTA TGCGCTGTAT CATGCCAAGC GCCATGCGCG CGGCCAGACG GTGATCTTCT CGAGCGAGCT GGAGGCGGAG ATCCGCAGCC GCAACGTGAT CGAGCATCTG CTGCTTGCCG CCGATTTCGA GCGCGAAATG GAGCTGGCGT TCCAGCCCAT CGTCGACGCC GCGAGCGCGC GCACGACGGG CTTCGAGGTG CTCGCACGCT GGCGCAGTCC CAAGCTGGGC CTGGTCTCGC CGTCGGCTTT CATTCCGGCT GCCGAGCGCA TCGGAGTCAT CCGCACGCTG ACGCGCGTCC TGCTGGTGAA GGCGCTGGCT GCGGCGCGGA CCTGGCCGGA GGACATCCGG ATGTCCTTCA ATCTGTCGGC GCATGACATC TGCTCGCCTG ACGGCATTCT GCCGCTGATC TCCGTCATTC ACGCCAGCGG TGTGCCGCCA CGGCGCATCG AGTTCGAGAT CACCGAGACC GCGGTGACCT TCGATTTCGT TCATGCCGAG CAGTCGATCT CAGCGCTCAA AGCCATCGGT TGCGGGATCT CCCTGGATGA TTTTGGCACC GGCTATTCCT CGCTCAGCCA CGTTCACCGG TTGCCGCTCG ACAAGCTCAA GGTCGATCGC AGCTTTGTCC ATGACGTGAA CGCCAACCCG ATCAGCCACA AGATCATCAA GTCGCTGACC GGCCTCTGCG CCGACATGGA GATTTCGTGC GTCGTCGAGG GCGTCGAGAC CAAGGAGCAG CTCGACAGCC TGCGCCGGCT CGGGGCCGAC TACATTCAGG GTTATTATTT CGCTGAGCCG ATGCCGGCAG ACGCCGTGCT CGGCTTCCTG ACCAGGGAGC GCCAACGTCT GGCCGAGCCG TCCGAAGGCA AGCTCGCCGG CGCCGGCGCT GCGTAG
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Protein sequence | MPDVRGYFAR AADLFRVPPD QPELTRAQFQ AFSKQVPLLY FILITNSLAL AYTFLPLAPI WLTMAVPALL SALTGFRMLW WLRQRDVGAS SDQILHKLRV TNRIAGPIGA LFVAWSFALF PYGDPFAKGQ VAFYMAVTVI GIIFCLMHLR SAALIVTLVV IVPYVIFFMS TGVHALRAIA VNQLLVSCAM VIVLFIYYRD FAALVASRKS LLAEQAATQA LSDENFRLAN LDSLTDLPNR RRFFSELAQA FEDAERDGTR LAVGIIDLDG FKPVNDTYGH SVGDRVLIEA ARRISDVCDS VGDNVHLARL GGDEFGLIVA GDPEDDELLA LGRQITERIQ LPYELDTAHT GVSCSTGFAL YPRSATAADA LYECADYALY HAKRHARGQT VIFSSELEAE IRSRNVIEHL LLAADFEREM ELAFQPIVDA ASARTTGFEV LARWRSPKLG LVSPSAFIPA AERIGVIRTL TRVLLVKALA AARTWPEDIR MSFNLSAHDI CSPDGILPLI SVIHASGVPP RRIEFEITET AVTFDFVHAE QSISALKAIG CGISLDDFGT GYSSLSHVHR LPLDKLKVDR SFVHDVNANP ISHKIIKSLT GLCADMEISC VVEGVETKEQ LDSLRRLGAD YIQGYYFAEP MPADAVLGFL TRERQRLAEP SEGKLAGAGA A
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