| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7582 |
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| Symbol | |
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| ID | 5155024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7968906 |
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| End bp | 7970978 |
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| Gene Length | 2073 bp |
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| Protein Length | 690 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640562227 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001243335 |
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| Protein GI | 148258750 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.961635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGA TCCTGTCCTG CCTGCCTGCC GATCACGATC TGCGTTACGT CGCCGCCGCG
CTGCTGGTCT GCGGGCTCGG CTCGATTCTG TCGATGCGGC TGCTCGCCCG CGTACGCCGC
AACACCGGCC TTCGCCGCTT TCACCTGTTA TTCCTGGCCG GCCTCGTCGC CGGCGGCACG
GTGTGGACCA CGCATTTCGC GGCCATCCTC GGTTACGATG CGCCGGGACA TCGCTCGTTC
GAGGCAGGGC TCACCTTCGC CTCGCTCGGC CTCGCCGTCG TGTTTTCCCT GCTCGGCTTC
TTCATCACCA CGCGCACCCA GCGCGGGCCG CTGATCGAGG CCGGTGGCGC GGTGTTCGGC
TTCGGCATTG CCGCGATGCA CTACACCGGC ATGAGCGCGC TCAATCTCGA TGGCATCAAG
ACCTGGCACG CGCCGGCGAT CTGGCTCTCG CTCGTGCTGG CGATGGGCTT CGGCGCCGTC
GCCGCCAACC GCATCGCGCG CCCTGTGACG CGGTTCTGCA AGTATGGCGG CTCGCTGGCG
ATGGCGCTCG CGATCCTCAG TCTGCATTTC ACCGGCATGG CCGCGCTGAC CGTGGCGCCG
ATGGCCGGCC TCGACACCCC CGCGCAAGCG CTGCCGGACA GCCTGCTGCT GATCAGCATC
GTCACCGGCA TCGGCCTGAT CATGGCGATG GCGGCCTCGG CCTACATGAT CGACATGCAG
GCGGCGCAGG AGGCGGTGGA GGGCTATCGG CAGCTGGCGC TGCAGGATCC ACTGACCGGA
CTGCCCAACC GCAACGGTCT CGGCCACCGG CTGGCGCCGC TGCTGGCGAC AGGCGACGAA
ACCGCCCATC TCGTCGTGCT CGCGATCGAC CTCGACCGCT TCAAGGACAT CAACGACGCG
CATGGCCACG CCGCCGGCGA CGCGGTGCTG AAGACCGTCG CCGAACGCAT CGCGGCGACC
TTGCAGCGGG GCGAGTTTCT GGCACGCATC GGTGGCGATG AGTTCGTTGC GGTCAAGAGC
GAGATCTTCG CACGCACGGA AGCCGCGAAA TTCGCCGACC GCATTCGCAG CCTGGTGCTC
GCACCGGTCG ATTGGGAGGA ACGCAGCCTC TCGGTCGGCT GCAGCATCGG CATCGCGCTG
CATCCCGAGC ACGGCCTCAC ATCGGACGAA TTGCTCACCC GCGCGGATCT GGCGATGTAC
CGCGCCAAGA GCCTCGGCCA AGGCAAGATC TGCACCTATG AGCCGTCGAT GGACGAAGCG
AGCCGTCGTC GCGCCGAGCT CGCCATCGAT CTGAAGCGCG CGCTGGTGCG CAACGAGTTC
GAGCTGCACT ACCAGGTGCA GAACGATACG CAGAGCGGCG AGATCATCGG CTTCGAGGCG
CTGCTGCGCT GGAATCATCC GGTGAAAGGC CGCGTGCCGC CGAATGATTT CATCCCGATG
GCCGAGCAGA CCGGTCTGAT TGTCGACATC GGCGACTGGG TGATGCGCAC CGCCTGCGCC
ACCGCGGCCA GCTGGAGCCA GCCGTTCAAG GTGGCCGTCA ACGTCGCGCC GATGCAGCTC
AATCACGACC TGCCGAAGCG TGTCGCGGAG GTGCTGCGCG AGACCGGCCT GGCGCCGGAG
CGGCTCGAGA TCGAGCTGAC CGAGACCGGC ATCATCGCCG ACCGCCAGCA CGCGCTGCAG
GTGATGCAGG CGCTGAAGGC GATCGGCGTC ACCGTGGCGA TGGATGATTT CGGCACCGGC
TATTCGTCGC TATCCACCCT CCAGGTGTTT CCGTTCGACA AGATCAAGGT CGACAAGAGC
TTCATCCAGT CGGTCGAGAC CAGCGTGCAT GCCGCGGCGA TCGTCAAGGC GACGTTGCTG
CTCGGGCGCA GCCTCAACAT CCCCGTACTG GCCGAAGGCG TCGAGACCGA GCAGCATCTC
GCCTTCCTGC GCGAGGAAGG CTGCAGCAGC GTGCAGGGTT TCCTGTTCGG CAAGCCGATG
CCGCAGGAGG CGATCCACCG GATGATCCGT GACGTCGGTG CCACGCAGGC GGTGGTCGCC
GAGGTGGCTG TCAAGAACGC CGCGGCGGCG TAA
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| Protein sequence | MLTILSCLPA DHDLRYVAAA LLVCGLGSIL SMRLLARVRR NTGLRRFHLL FLAGLVAGGT
VWTTHFAAIL GYDAPGHRSF EAGLTFASLG LAVVFSLLGF FITTRTQRGP LIEAGGAVFG
FGIAAMHYTG MSALNLDGIK TWHAPAIWLS LVLAMGFGAV AANRIARPVT RFCKYGGSLA
MALAILSLHF TGMAALTVAP MAGLDTPAQA LPDSLLLISI VTGIGLIMAM AASAYMIDMQ
AAQEAVEGYR QLALQDPLTG LPNRNGLGHR LAPLLATGDE TAHLVVLAID LDRFKDINDA
HGHAAGDAVL KTVAERIAAT LQRGEFLARI GGDEFVAVKS EIFARTEAAK FADRIRSLVL
APVDWEERSL SVGCSIGIAL HPEHGLTSDE LLTRADLAMY RAKSLGQGKI CTYEPSMDEA
SRRRAELAID LKRALVRNEF ELHYQVQNDT QSGEIIGFEA LLRWNHPVKG RVPPNDFIPM
AEQTGLIVDI GDWVMRTACA TAASWSQPFK VAVNVAPMQL NHDLPKRVAE VLRETGLAPE
RLEIELTETG IIADRQHALQ VMQALKAIGV TVAMDDFGTG YSSLSTLQVF PFDKIKVDKS
FIQSVETSVH AAAIVKATLL LGRSLNIPVL AEGVETEQHL AFLREEGCSS VQGFLFGKPM
PQEAIHRMIR DVGATQAVVA EVAVKNAAAA
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