Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7581 |
Symbol | gcd |
ID | 5155023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7966278 |
End bp | 7968677 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640562226 |
Product | quinoprotein glucose dehydrogenase |
Protein accession | YP_001243334 |
Protein GI | 148258749 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.232583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.85577 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTG CCCGCGATCT GCAGCGTGCA CCGCTGCTGA CCTTCACTGC CGTCATCGTC GGCCTGATGG GCCTTGCTTT GCTTGCCGGC GGCGCCTGGC TCGCGGCGAT CGGCGGCTCG CTCTATTACG TCGTCGCAGG CGCCGCCCTG CTCGGCACCG CGTGGCTGCT GTGGCAGCGG CGGGCTGCGG CGTTGTGGCT GTATGCAGCG CTGCTGCTGG GCACGATGAT CTGGGCGATC TCTGAGGTCG GGCTGGATTT CTGGTCGCTG GCCCCGCGCG GCGACGTGCT GGCGCCGCTC GGCGTCTGGC TGCTGCTGCC GTTCATCACC GCGCATTTGG TCGGCGACAT GCGCTCCGCG CGCTGGGGTT TGGTCGCGGT GCTCGCGGTC GCCTTGGTCG TGCTCGGCGC CGCGCTCCAC GGCGATCGTT TCGGGGTCAA TGGCGCTTTG CCGCAGGCTG CAGAGGCCTC GGCTGGCACC GACACCGCGC CGGCCGAGGC GAAAGCCGAC TGGACCGCCT ATGGCGCCAG CAATTTCGGC ACCCGGTTCT CGAGCCTGAA GCAGATCACC GCGGACAACG TGAAGAACCT CCAACTCGCC TGGGAATTCC AGACCGGCGA CCACAAGGGC CCCGACGATC CCGACGAGTT CACCAACGAG GTAACGCCGC TGAAGATCGG CGATCTGCTC TACACCTGCT CGCCGCACCA GATCGTGTTC GCGCTGGACG CCGCCACCGG CAGACTGCGC TGGAGATTCG ATCCCAAGAT CGAGCACCAC AAGAACTTCC AGCACATGAC CTGCCGCGGC GTCGCCTATC ACGAGACCAG GCCGGGCGCG GTCGATATCG CAGGCGCCGC GGCGCCGGCC GAATGCGCCA GGCGCATCTT CCTGCCGACC GATGACGGAC GGCTGTTCGC GCTCGATGCC GCCAGCGGCA AGCCGTGCGA GGGTTTTGGT GCCCACGGCC AGATCGATCT CAAGGCCGGC AACGAGATCA CCACACTCGG CTTCTACGAG GGCACGTCGC CGCCGGTGGT CACCGACAAG GTGGTGATCA TGGCGGGCGC CGTGATTGAC AACTACTCCA ACAAGGTGCC GTCGGGCGCG ATCCGCGGCT TCGACGTCTA CACGGGCAAA CTGCTGTGGG CGTTCGATCC CGGCAATCCC GATCCGAACG AGATGCCGTC GGCGACGCAT CATTTCACGC CAGGCTCGCC GAATGGCTGG AGCGTCGGCG CCGCCGACGA AGCGCTCGGC CTCGTCTACA TCCCGCTCGG CTCGAGCTCG CCGGACATCT GGGGCGGCAA TCGCTCGGCC AACAATGAGC GCTACGATTC CGCGCTGGTG GCGCTCGACA TCGCCACGGG AAAGCTGCGC TGGTCGTTCC AGAACGTGCA TCACGATCTC TGGGACATGG ACATGCCGTC GCAGCCGAGC CTGGTCGACA TGCCCGGCAA GGACGGCGTG GTGCCGGCGA TCTACGTGCC GGCCAAGACC GGCAACATCT TCGTGCTCGA CCGCCGCGAT GGCCATCTGT TGGTCCCCGC GCCGGAGAAG CCGGTACCGC AGGGGGCTGC GCCCGGCGAC CGGCTGTCGC CGACGCAGCC GTTCTCCGAG CTGAGCTTCC GCCCGCGCAA GGATCTCACC GGCGCGCAGA TGTGGGGCAC GACGATGTTC GATCAGCTCG CCTGCCGCAT CATGTTCAAG CGGCTGCGCT ATGAGGGGCC GTTCACGCCG CCGTCCGAGC AGGGCACGCT GGTGTTTCCC GGCGATTTCG GCATGTTCGA ATGGGGCGGC ATCGCCATCG ATCCTGTGAG GAAGATCGCG ATCGCCAATC CGCAATCGAT CCCGTTCGTG TCGCGGCTGG TGCCGCGCGG CAAGGACAAT CCGGCCGCGC CGAATTCGGC GCATCCGCCG GGCACCGAGC TCGGCGTGCA GCCGATGTAC GGCACGCCCT ATGGCGTCGA GCTCGGCATC TTCCTGTCGC CGCTCGGCAT CCCCTGCATG GCGCCGCCCT GGGGAAGTCT CGCTGCGATC GACCTGAAGA CCAACCAGAT CGTCTGGCAG CACCGCGTCG GCACCATCCG CGACCAGGCG CCGCTGCCGC TGCCGTTCAA GCTCGGCGTG CCGATGCTCG GCGGCCCGAT GGTGACCGCG GGCGGCGTGG CCTTCCTGAC CGGCACGATG GACGACTATA TCCGCGCCTT CGACGTCAAG GACGGCCGCC TGCTGTGGCA GGACCGGCTG CCCGCCGGCG GACAGTCCAC GCCCATGACC TATGAGGCCG GCGGCAGGCA GTACATCGTG ACCGTGGATG GCGGCCACGG ATCGTTCGGC ACCAGGCTCG GCGATTACGT CCGCGCCTAT GCACTGCCGG GCAACGTCGC CAGCCGCTGA
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Protein sequence | MAAARDLQRA PLLTFTAVIV GLMGLALLAG GAWLAAIGGS LYYVVAGAAL LGTAWLLWQR RAAALWLYAA LLLGTMIWAI SEVGLDFWSL APRGDVLAPL GVWLLLPFIT AHLVGDMRSA RWGLVAVLAV ALVVLGAALH GDRFGVNGAL PQAAEASAGT DTAPAEAKAD WTAYGASNFG TRFSSLKQIT ADNVKNLQLA WEFQTGDHKG PDDPDEFTNE VTPLKIGDLL YTCSPHQIVF ALDAATGRLR WRFDPKIEHH KNFQHMTCRG VAYHETRPGA VDIAGAAAPA ECARRIFLPT DDGRLFALDA ASGKPCEGFG AHGQIDLKAG NEITTLGFYE GTSPPVVTDK VVIMAGAVID NYSNKVPSGA IRGFDVYTGK LLWAFDPGNP DPNEMPSATH HFTPGSPNGW SVGAADEALG LVYIPLGSSS PDIWGGNRSA NNERYDSALV ALDIATGKLR WSFQNVHHDL WDMDMPSQPS LVDMPGKDGV VPAIYVPAKT GNIFVLDRRD GHLLVPAPEK PVPQGAAPGD RLSPTQPFSE LSFRPRKDLT GAQMWGTTMF DQLACRIMFK RLRYEGPFTP PSEQGTLVFP GDFGMFEWGG IAIDPVRKIA IANPQSIPFV SRLVPRGKDN PAAPNSAHPP GTELGVQPMY GTPYGVELGI FLSPLGIPCM APPWGSLAAI DLKTNQIVWQ HRVGTIRDQA PLPLPFKLGV PMLGGPMVTA GGVAFLTGTM DDYIRAFDVK DGRLLWQDRL PAGGQSTPMT YEAGGRQYIV TVDGGHGSFG TRLGDYVRAY ALPGNVASR
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