Gene BBta_7542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7542 
Symbol 
ID5155552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7923888 
End bp7925354 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content67% 
IMG OID640562189 
Producthypothetical protein 
Protein accessionYP_001243297 
Protein GI148258712 
COG category[R] General function prediction only 
COG ID[COG4784] Putative Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGG TGAACTGCGG TTCGCGGATC GCACCAGCTT TGCTGTGCGT CGGCTTGATG 
CTGGCCGGCT GCAGCGACAT GGGCAAGCTG CAGCAAGCGA CTGCGCCGAT GCCGACGCCG
CGGCCGAAGC CGGCGATGGT TCAGAGCACG CCCGCCAGCG ATCGCGAGCA CGAGCGCATT
TTGGCAACCT ACGGCGGTGC CTATGAGGAT CCCCAGCTCG AGGGCCTGAT CAGCCGTATC
GTCGACCGGC TGGTTGCCGC GTCGGACCGG CCCGACCAGG GCTACAAGGT CACGATCCTG
AACTCGGGTG CGGTCAACGC CTTCGCGTTG CCGACCGGAC AGCTTTACGT CACCCGCGGC
TTGATCGCGC TTGCCAACGA CACCTCGGAA CTGTCGTCGG TGCTGAGCCA CGAAATGGCG
CATGTGTTGG CGCGTCACGC CGCGATCCGC GAGGACCAGG CGCGCCAGGC GGCGGTCGTC
ACCCGCGTCG TGTCCGACAT GAGCAATGAT CCGGATCTGA CGGCGCTGGC GCTCGCCAAG
ACCAAGCTGA CGATGGCGAG CTTCTCGCGC ACCCAGGAGT TCGAGGCCGA CGGCATCGGT
GTCGGCATCT CGGCCAAGGC CAAGTTCGAT CCCTATGGCG CGGCCCGGTT CCTGACCTCG
ATGGAGCGCA ATGCCGAGCT GAAGGCCGGC AAGGTCGCGA TCGACCCCCG CGCGCAGGAT
TTCCTCTCCT CGCATCCGGC GACGCCGGAG CGGGTGCAGA ATGCGGCGGC GATTGCGAAA
CAATACGTCT CGCCGGAGGC CAGGGAGCAC GACCGCGAGA CCTATCTGGC CGCGGTGGAC
AATATCGTCT TCGGCGAGGA CCCCAGCGAA GGCTTCGTGC GTGGGCGGCG GTTCCTGCAT
CCCAAGCTGG GCTTCACGTT CCAGGCCCCC GAAAACTTCA CCCTCGACAA CACCGCGCAG
GCGGTGATCG GCGTGCGCGA AGGTGGCGCC CAGGCGATGC GGTTCGACGT CGTGCGGGTG
CCCGCACAGC AGACGCTCGG CGACTATCTC AACTCCGGCT GGATGGAGAA TGTCGACAAG
TCAGCGACCG AGGAGCTGAC CATCAACGGC TTCCCGGCGG CGTCGACCAC AGCCAGCGGC
GACCCCTGGC AGTTCAAGGT CTATGCGCTG CGCGTCGGCA GCGACGTCTA CCGCTTCATC
TTCGCGTCCC GCCAGAAGAG CACCGAGAGC GAGCGCAACG CTCGCGAGAC GGTGAATTCC
TTCCGCCGCC TCAGCCTTGA GGAATCGCAG TCGGCGCGCC CGCTGCGCAT CAAGGTCATC
ACGGTCCAGC CGGGCGACAC CGTCGAGTCG CTGGCGCATC GGATGTCCGG GGTCGACCGA
CCGATCGAGC GTTTCCGCGT TCTCAACGGC CTCGACGCCC GCGCCCAGGT CAAGGTCCGC
GACCGCGTCA AGATCGTGGT GGAGTGA
 
Protein sequence
MTMVNCGSRI APALLCVGLM LAGCSDMGKL QQATAPMPTP RPKPAMVQST PASDREHERI 
LATYGGAYED PQLEGLISRI VDRLVAASDR PDQGYKVTIL NSGAVNAFAL PTGQLYVTRG
LIALANDTSE LSSVLSHEMA HVLARHAAIR EDQARQAAVV TRVVSDMSND PDLTALALAK
TKLTMASFSR TQEFEADGIG VGISAKAKFD PYGAARFLTS MERNAELKAG KVAIDPRAQD
FLSSHPATPE RVQNAAAIAK QYVSPEAREH DRETYLAAVD NIVFGEDPSE GFVRGRRFLH
PKLGFTFQAP ENFTLDNTAQ AVIGVREGGA QAMRFDVVRV PAQQTLGDYL NSGWMENVDK
SATEELTING FPAASTTASG DPWQFKVYAL RVGSDVYRFI FASRQKSTES ERNARETVNS
FRRLSLEESQ SARPLRIKVI TVQPGDTVES LAHRMSGVDR PIERFRVLNG LDARAQVKVR
DRVKIVVE