| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7539 |
|---|
| Symbol | |
|---|
| ID | 5155550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7921655 |
|---|
| End bp | 7922839 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640562187 |
|---|
| Product | putative ABC transporter (substrate binding protein) |
|---|
| Protein accession | YP_001243295 |
|---|
| Protein GI | 148258710 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCGT CCGCGCTGAC GCTGTCGGTC GGCGCGGCGC ATGCGCAGAG CAAGACGCCG
CTGAAGATCG GCGGCATTCT CGACATGTCG AGTCTCTATG CCGACATCAC CGGTCCCGGC
AGCGAGACCG CGGCGAAGAT GGCGGTCGAG GATTTCGGCG GCGAGGTGCT GGGACGCAAG
ATCGAGGTGC TCGCGGCCGA TCATCTCAAC AAGGCCGATC TCGCCGCCAA CATTGCCCGC
GACATGCTCG ACAATCAGGG CGTCGAGATG ATCTACGACG TCGCGGCCTC CGCCACCGCG
CTCGCCGCTG GCGAGATCGC CAAGGCGCGC AACAAGATCA TCATCTTCAA CGGCCCCGGT
TCGGTCCGGC TTTCCAACGA AGCCTGCGGC CCCTACACCG TGCACTACGT GTTCGATACG
TTCGCGCAGG CCAACGTCAC CGGCCTTGCG GCCGTGAAGT CCGGCCTCGA CAGCTGGTTC
TTCCTCACCG CCGACTACGC CTTCGGCCAG GACCTGGAGA AGGACACGAC CGCTGTCGTG
GTGAAGTCCG GCGGCAAGGT GCTGGGCAGC GTGCGGCATC CGCTCAACAC GTCCGACTTC
TCGTCCTTCC TGCTGCAGGC GCAGGCCTCC AAGGCCAAGG TAATCGGGCT CGCCAATGCC
GGCGGCGATA CGATCAACGC GATCAAGCAG GCCGCGGAAT TCGGCCTCAC CAAGGGGGGC
CAGAAGCTGT CACCGCTGCT CGCTTTCGTC TCCGATATCG ACAGCGTCGG GCTGGAGACC
GCGCAGGGGC TGCTGGTCGC GGAGGCGTTC TACTGGGATC TCAACGACGA GACCCGCGCC
TTCACGAAGC GTTTCATGGA GCGCACCAAG CGGGTTCCGA CCTCGGCCCA GGCCGGCGTC
TATTCGTCGG TAACGCACTA TCTGAAGGCG GTGAAGGCGG CAGGCACCAC GGATCCCGAC
GCCGTGATGA AGGTCATGCG GGCAACCCCG ATCAATGACA TGTTCGCCAA GGGCGGCCGG
ATTCGCGAGG ACGGCCGCAT GGTGCATGAC ATGTATCTGT TCGAGGTCAA GAAGCCCTCG
GAGTCGAAGG CCAAGTCCGA CGACTACAAG CTGCTTGCGA CGGTGCCCGG CAACGAGGCC
TTCCAGTCTC TGGAATTGTC GCGCTGTCCG CTGGTGAAAA AGTAG
|
|---|
| Protein sequence | MLASALTLSV GAAHAQSKTP LKIGGILDMS SLYADITGPG SETAAKMAVE DFGGEVLGRK
IEVLAADHLN KADLAANIAR DMLDNQGVEM IYDVAASATA LAAGEIAKAR NKIIIFNGPG
SVRLSNEACG PYTVHYVFDT FAQANVTGLA AVKSGLDSWF FLTADYAFGQ DLEKDTTAVV
VKSGGKVLGS VRHPLNTSDF SSFLLQAQAS KAKVIGLANA GGDTINAIKQ AAEFGLTKGG
QKLSPLLAFV SDIDSVGLET AQGLLVAEAF YWDLNDETRA FTKRFMERTK RVPTSAQAGV
YSSVTHYLKA VKAAGTTDPD AVMKVMRATP INDMFAKGGR IREDGRMVHD MYLFEVKKPS
ESKAKSDDYK LLATVPGNEA FQSLELSRCP LVKK
|
|---|
| |