| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7517 |
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| Symbol | |
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| ID | 5153863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7895956 |
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| End bp | 7898067 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640562166 |
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| Product | hypothetical protein |
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| Protein accession | YP_001243275 |
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| Protein GI | 148258690 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.328747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGGAG CGGTTGTCAA CCGGTTGCTG ATCGAGGCGG CTGATCACTA CAATGCAGGG
CGGTCTGAGC CCGCGCAGGC GCTCTGTCGC GACATTCTCG ATCGTCAGTC GGATCATCTG
CCGGCGTTGC ATCTCTCGGC GATCCTTGCT TTCGCCGACG GCCGCATGTC CGAGGGCGCG
GCGCTGCTGG GCCGTTTGTT TGCGCATGAT CCCGGCCACG CGCCGGCCTA TGTGACGCTC
GGCGATGCGC TCGCGGTCAA GGGTGAGCGC CACGGCGCGG CCGATGCGTT TGCGCGCGCC
GCCGCGCTGC GGCCGCGGGA TGCCAGCATC CACAGCAAGC TCGGCACCGC GCTGCTCGCG
CTGTCGCGCT TCGCTGAGGC CGAGGCCGCC TATCGCCGCG CGCTGGCGCT CGATCCCGCG
CTGTCGCATG CGCGCTGGAA TCTTGCGCTC GCTTTGACCC GTCAGGGACG GCTCGCCGAG
GCCGAAGCCG CCTATCGTGC GCTGCTCGAC CACGATCCGG CCCATCCCGA TGGCTGGCGG
GCGCTCGCGC ATGTGCTGGC CGACCAGGGC CGCTACGATG CGGCCGTACC TGCCTATCGG
CAGGCGCTGG CCGCGCAGCC GGCTGATGCC GGCCTTCATG TCAGTCTCGG CGACGTGCTC
TACAAGCAGC GGGCCTTCGC CGATGCCGCG CGTCATTATC GCTTGGCCGC CGAGCTCGCC
CCCGACGACG CCAACGCCGC GCGGCTGCTT GGCCATGCGC TGCACGAGGC TGGACGCGCG
ACCGAGGCGA TCGATGCCTA TCGCCGCGCG GTCGCGCTCG ACCCGACCGA TGTCGTCGTG
CTTTCCAATC TCGCCGCCTG CCTGTGCGGC GCCGGCCAGC TCGAGGCCGC CGCCGCGGCT
TGCGAGCACG CGCTGGCGCT GCAGCCCGAC CACGCTCCGG CGCACACCAA TCTCGGGATC
ATCCATGAGA AGCGCGGCGA GATCGACGCG GCCGTGTCGG CGCATCGTCG CGCCATTGCC
GCCGACCCGG CCTATGCCAA GGGCCATGCT AATCTCGCGG TGGCGCTGCG CAATGCCGGC
GACATCGACG CCGCGCTGGC CGCCTCGCAT CGCGCCGTCG CGCTGGCGCC CGACAATGCG
CTCGCCCGCT ACAACCACGC GCATTTCCTG CTGATGTGCG GCGACCTGCC GAACGGCTTT
GCCGAGCATC GCTGGGGCCG CGACTGTCCG GACCTCGCCG CGGGCATGCC GCGCTTCGAT
GTGCCGGAAT GGCAGGGCGA GCCGCTTGAG GGACGGACGC TGCTGCTGTT TGCCGAATAC
GGCATTGGCG ATGCGCTGCA GTTCGTCCGC TACATCGATC GCGTCAAGCG AATGGGCGGT
TCGGTCGTGT TGCAGGTGCA GCCGGCGATT GCGCCGCTGC TGCGCTGCCT GGAGGGCGTC
ACCGTGCTGG CGCGCGGCGA GACGCTGCCG CCATGCGATC TGCAGCTGCC GCTGATGGAC
CTGCCGCGCA TCTTCGGCAC CACGCTGGAG ACGATCCCGG CCGATGTGCC CTATCTGACC
GCCGATCCGA TCAAGATGGC GGCGTGGCGC AACGTGCTCG GCCGCGCGCC GCAGTTGAAG
GTCGGCGTGG TCTGGGCCGG CAATCCCCGG CACAAGGGCG ACCGCCAGCG TTCGCTCGCT
GCGCGCGACG TGCTGCCGCG GCTGCTGATG CCCGGCGTGC AGCTCTACTC TCTGCAGAAG
GAGCCGCGGC CCGACGATGC GCCCACGCTG CTCGATCTCG GCAGCGACAT CATCGACTTC
GCGCCACTGC TGAAGGATTT CGCCGAGACG GCTGCGGCCG TCTCGGCGCT CGACCTCGTC
ATTTCCGTCG ATACGTCGGT CGCGCATCTC GCCGGTGCGC TGGGCCGCCC GGTGTGGATG
CTGCTGCCCT ATGCGCTTGA CTGGCGCTGG CTGCGCGACC GCGCCGACAC CCCCTGGTAT
CCAACCATGC GGCTGTTCCG GCAGGAGCGG CCGATGGCCT GGGACGGCGT GCTGGCGCGG
ACGGCGGCCG AGCTGGCGCG GGTGGCCGCG GGGGAGCGCG GGTTGTTGCT GCCTGAATCG
ATGCCGAGTT GA
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| Protein sequence | MGGAVVNRLL IEAADHYNAG RSEPAQALCR DILDRQSDHL PALHLSAILA FADGRMSEGA
ALLGRLFAHD PGHAPAYVTL GDALAVKGER HGAADAFARA AALRPRDASI HSKLGTALLA
LSRFAEAEAA YRRALALDPA LSHARWNLAL ALTRQGRLAE AEAAYRALLD HDPAHPDGWR
ALAHVLADQG RYDAAVPAYR QALAAQPADA GLHVSLGDVL YKQRAFADAA RHYRLAAELA
PDDANAARLL GHALHEAGRA TEAIDAYRRA VALDPTDVVV LSNLAACLCG AGQLEAAAAA
CEHALALQPD HAPAHTNLGI IHEKRGEIDA AVSAHRRAIA ADPAYAKGHA NLAVALRNAG
DIDAALAASH RAVALAPDNA LARYNHAHFL LMCGDLPNGF AEHRWGRDCP DLAAGMPRFD
VPEWQGEPLE GRTLLLFAEY GIGDALQFVR YIDRVKRMGG SVVLQVQPAI APLLRCLEGV
TVLARGETLP PCDLQLPLMD LPRIFGTTLE TIPADVPYLT ADPIKMAAWR NVLGRAPQLK
VGVVWAGNPR HKGDRQRSLA ARDVLPRLLM PGVQLYSLQK EPRPDDAPTL LDLGSDIIDF
APLLKDFAET AAAVSALDLV ISVDTSVAHL AGALGRPVWM LLPYALDWRW LRDRADTPWY
PTMRLFRQER PMAWDGVLAR TAAELARVAA GERGLLLPES MPS
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