Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7443 |
Symbol | |
ID | 5152452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7817208 |
End bp | 7819637 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640562099 |
Product | conjugal transfer ATPase TrbE |
Protein accession | YP_001243208 |
Protein GI | 148258623 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTG CCGAGTATCG TCGCCATAAC CAGAGCCTCG CCGACTTCCT GCCGTGGGCG GCGCTCGTCG CCAAGGGCGT TGTTCTCAAC AAGGATGGCT CCTTCCAGCG CACCGCACGC TTTCGCGGTC CAGACTTGGA TTCTTCCACG CCCGCCGAGT TGGTGGCCAT CACGTCGCGT CTCAATAATG CGTTGCGTCG CCTTGGCTCC GGCTGGGCCG TGTTCATTGA GGCCCAGCGC GTGCCGGCGC ACAGGTATCC GTCAACTCAA TTTCCGGATC CCGTTTCGGC GCTGGTCGAT GCCGAACGTC GAGCCCAATT CGAAGAAGAA GGCGCGCATT TCGAGAGCGG CTACTTCCTG ACACTGCTCT GGCTGCCGCC CGCCGATGAC GCGGCCCGCG CGGAAGCTTG GCTCTATGAG AACCGCGCCC AGGGCGCCGC CGACTGGCGT GCCACGCTCG AAGGTTTCGT CGACCGCACC GATCGCGTGC TCGCGCTGCT CGAAGGCTTC ATGCCGGAAT CGGATTGGCT CGATGACGCC GAGACCCTGA CCTACCTGCA TTCCTGCATC TCGACGCGGC GCCAGCGCGT GCGCGTGCCG GAAACGCCGA TGTACCTCGA CGCCATCCTG GTGGACGAGG ACCTGACGGG TGGCCTCGAA CCACGGCTCG GCCGCGCACA TCTGCGCACG CTCACCATCA TGGGCTTTCC ATCACAGACT TGGCCGGGCC TGCTCGACGA CCTCAATCGC CTGGCGTTTT CCTATCGCTG GGCGACACGC GCCATCTGCC TCGACAAGAC CGACGCGGCC AAGCTCCTCG GCAAGATCCG CCGTCAGTGG TTCGCCAAGC GCAAGAGCAT CATGGCGATC CTCAAGGAGG TGATGACCAA CGAGGCGTCG GTGCTGATGG ACTCCGACGC CGCCAACAAG GCGCTCGATG CCGACGCCGC TCTGCAAGAA CTTGGCACCG ACCTCGTCGG CGAGGCCTAC GTCACCGCCA CTGTTACCGT CTGGGACGAT GATCCGCGGA TCGCGGACGA GCGCCTTCGC CTGGTCGAGA AGGCCATTCA GGGCCGCGAC TTCACCTGCA TGCGCGAAGG CGTCAACGCG ATCGAAGCCT GGCTTGGGTC TCTCCCAGGG CATGTCTACG CCAATGTCCG GCAGCCGCCG ATCTCCACGC TCAACCTCGC GCATATGATG CCGTTTTCGG CGGTTTGGGC CGGGCCTGAA CGGGACGAGC ACTTCCAGGC GCCGCCGCTT CTCTTCGCCA AGACCGAGGG ATCGACCCCG TTCCGCCTCA GCCTCCATGT CGGGGATGTC GGCCACACCT TGATCGTCGG CCCGACGGGC GCCGGCAAGA GTGTGCTGCT CGCGTTGATG GCCTTGCAGT TCCGGCGCTA TGCCGGTGCA CAGGTCTTCG CCTTCGACTT CGGCGGCAGC ATCCGGGCGG CGGCGCTCGC GATGGGCGGC GATTGGCACG ATCTCGGCGG AGCGCTCTCC GACAGCGCCG CCGAGCCCGT CGCGCTCCAA CCGCTCGCGC GGGTCGATGA TCCCGGAGAG CGCGCGTGGG CCGCCGAATG GGTCGCGGCG CTCCTCGGTC GCGAGTCCGT CACCGTCACT CCGGAACTGA AGGAACACCT ATGGTCAGCG CTGACTTCGC TTGCGTCCGC GCCTATCCAG GAGCGCACCA TCACCGGGCT CTCGGTGCTC CTGCAATCAA ATGCCCTGAA ACAGGCGATC CAGCCCTACA CCGTGGCAGG CCCCTGGGGA CGACTGCTCG ACGCCGAGAC GGAGCGGCTC GGCGAGGCCG AAGTCCAGGC TTTCGAAACG GAAGGGTTGA TCGGCGCGGG CGCGGCTCCA GCCGTCCTAT CCTATCTCTT CCATCGCATC GAAGATCGCT TCGACGGCCG ACCCACCTTG CTCATCGTCG ACGAAGGTTG GCTCGCCCTC GACGATCCCG GCTTCGCCGG GCAACTGAGA GAGTGGCTGA AGACGCTTCG GAAAAAAAAT GCCAGCGTCA TCTTTGCCAC GCAGTCGCTT GCCGACATCG ACGGCAGTGC GATCGCACCA GCCATCATCG AGAGCTGCCC GACCCGCATC CTGCTTCCCA ACGAGCGCGC GCTCGAGCCG CAGATCGCGG CGATCTACCA GCGCTTCGGT CTCAACGATC GCCAAATTGA GATTCTGAGC CGCGCGACGC CGAAGCGCGA ATATTACTGC CAGTCGCGAC GCGGCAATCG CCTATTCGAA CTCGGGCTGT CCGAAGTCGC GCTCGCCTTC ACCGCCGCCT CGGCGAAATC CGATCAGACC GCCATCGAAG AGCTGCTCGC GGAACACGGC CGCGGCGGCT TCACCGCCGC CTGGCTGCGC CGAAAGGATC TCGACTGGGC AGCGGACATG CTCACCCACA ACCAGGAGAC CACGTCATGA
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Protein sequence | MNLAEYRRHN QSLADFLPWA ALVAKGVVLN KDGSFQRTAR FRGPDLDSST PAELVAITSR LNNALRRLGS GWAVFIEAQR VPAHRYPSTQ FPDPVSALVD AERRAQFEEE GAHFESGYFL TLLWLPPADD AARAEAWLYE NRAQGAADWR ATLEGFVDRT DRVLALLEGF MPESDWLDDA ETLTYLHSCI STRRQRVRVP ETPMYLDAIL VDEDLTGGLE PRLGRAHLRT LTIMGFPSQT WPGLLDDLNR LAFSYRWATR AICLDKTDAA KLLGKIRRQW FAKRKSIMAI LKEVMTNEAS VLMDSDAANK ALDADAALQE LGTDLVGEAY VTATVTVWDD DPRIADERLR LVEKAIQGRD FTCMREGVNA IEAWLGSLPG HVYANVRQPP ISTLNLAHMM PFSAVWAGPE RDEHFQAPPL LFAKTEGSTP FRLSLHVGDV GHTLIVGPTG AGKSVLLALM ALQFRRYAGA QVFAFDFGGS IRAAALAMGG DWHDLGGALS DSAAEPVALQ PLARVDDPGE RAWAAEWVAA LLGRESVTVT PELKEHLWSA LTSLASAPIQ ERTITGLSVL LQSNALKQAI QPYTVAGPWG RLLDAETERL GEAEVQAFET EGLIGAGAAP AVLSYLFHRI EDRFDGRPTL LIVDEGWLAL DDPGFAGQLR EWLKTLRKKN ASVIFATQSL ADIDGSAIAP AIIESCPTRI LLPNERALEP QIAAIYQRFG LNDRQIEILS RATPKREYYC QSRRGNRLFE LGLSEVALAF TAASAKSDQT AIEELLAEHG RGGFTAAWLR RKDLDWAADM LTHNQETTS
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