| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7353 |
|---|
| Symbol | rkpK |
|---|
| ID | 5149196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 7719233 |
|---|
| End bp | 7720552 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640562014 |
|---|
| Product | UDP-glucose 6-dehydrogenase |
|---|
| Protein accession | YP_001243123 |
|---|
| Protein GI | 148258538 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.870632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATTG CGATGATCGG CACGGGTTAT GTGGGGCTGG TGTCCGGTGC CTGCTTCGCC
GATTTCGGCC ACCAGGTCAC CTGCGTGGAC AAGGATGAAA GCAAGATCGC CGCGTTGCAT
CGTGGAGAAA TCCCGATCTT CGAGCCCGGC CTGGATGCGC TGGTCGCAGC GAATGTGAAG
GCCAAGCGGC TCGATTTCAC CACCGATCTC AAGCAGCCCG TCGCCGACGC GGATGCGGTC
TTCATCGCGG TCGGCACGCC GTCACGGCGC GGCGACGGCC ATGCCGATCT TACTTACGTC
TATGCTGCCG CGCGCGAGAT CGCGGCCTGC CTGACCGGCT TCACCGTGGT CGTGACCAAA
TCGACGGTGC CTGTCGGCAC CGGTGACGAG GTGGAGCGCA TCATCCGCGA GACCAATCCG
TCGGCCGATG TCGTGGTCGC CTCCAATCCG GAGTTCCTGC GCGAGGGCGC TGCGATCCGC
GATTTCAAAT GGCCCGATCG CATCGTGGTC GGCACTGCCG ACGAGCGCGG CCGCAAGGTG
CTCGGCGACA TCTATCGTCC GTTGTCGCTG AACCAGGCGC CGATCATGTA CACGGCCCGG
CGCACCGCCG AACTGATCAA ATACGCCGCC AACGCGTTTC TCGCGACCAA GATCACCTTC
ATCAACGAGG TTGCCGATCT CGCCGAGAAG GTCGGCGCCG ACGTGCAAGA GGTGGCGCGC
GGCATCGGTC TCGACAACCG CATCGGCGCG AAGTTCCTGC ATGCCGGTCC GGGCTTCGGC
GGCTCGTGTT TCCCGAAGGA CACGCGCGCG TTGATCAAGA TCGCGCAGGA CAATGACACC
CAGCTGCGCA TCGTCGAGTC GGTGCTCGCC GTCAACGACA ACCGCAAGCG AGCGATGGCC
CGCAAGGTGG CGCACGCCGT CGGCGGCAAT CTGCGTGGCA AGACGATCGC GGTGCTGGGT
CTCACCTTCA AGCCCGAGAC CGACGACATG CGCGAGGCGC CGTCGATCCC GCTGGTCACC
GGGCTGCTCG ACATGGGCGC CAAGGTGCGC GCGCATGATC CGGTCGGCAT CGAGCAGGCC
AAAAAGGAGC TGCCGGAGAT TGCCTATTAC GACGACCCCT ATGATTGCGC GACAGGGGCC
GATGCGATCG TGCTGGTCAC CGAATGGGTG CAGTACCGCG CCATGGATCT TGATCGCCTC
AAGGAGGTGA TGGCCCATCC CGTCGTGGTC GACCTGCGCA ACGTCTATCG CCCCGACGAG
ATGGCGGCGC ACGGCTTCAT CTATGAGAGC GTCGGCAGGC CCTCGGCCAA GGGGGCGTGA
|
|---|
| Protein sequence | MRIAMIGTGY VGLVSGACFA DFGHQVTCVD KDESKIAALH RGEIPIFEPG LDALVAANVK
AKRLDFTTDL KQPVADADAV FIAVGTPSRR GDGHADLTYV YAAAREIAAC LTGFTVVVTK
STVPVGTGDE VERIIRETNP SADVVVASNP EFLREGAAIR DFKWPDRIVV GTADERGRKV
LGDIYRPLSL NQAPIMYTAR RTAELIKYAA NAFLATKITF INEVADLAEK VGADVQEVAR
GIGLDNRIGA KFLHAGPGFG GSCFPKDTRA LIKIAQDNDT QLRIVESVLA VNDNRKRAMA
RKVAHAVGGN LRGKTIAVLG LTFKPETDDM REAPSIPLVT GLLDMGAKVR AHDPVGIEQA
KKELPEIAYY DDPYDCATGA DAIVLVTEWV QYRAMDLDRL KEVMAHPVVV DLRNVYRPDE
MAAHGFIYES VGRPSAKGA
|
|---|
| |