| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7332 |
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| Symbol | dapD |
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| ID | 5149515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7697350 |
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| End bp | 7698195 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640561992 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_001243102 |
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| Protein GI | 148258517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.972084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATTGT CCGCCCTGGA ATCCACCATC AACAGCGCCT TCGATGCCCG TGATGGCGTC
TCGACCACGA CCAAGGGCGA GATCCGCGAC GCCGTGGAGA GTGCGCTGGA GCTGCTCGAC
AAGGGCGAGG CGCGCGTCGC CGAGCGCGGC ACGGACGGCA CATGGAGCGT CAACCAGTGG
CTGAAGAAGG CCGTGCTGCT GTCCTTCCGC CTCAACGACA TGAGCGTCAT TCCGGGCGGC
CCCGGCCAGG CGTCATGGTG GGACAAGGTG CCGTCGAAAT TCGAAGGCTG GGGCGAGAAC
CGCTTCCGCG AGGCCGGCTT CCGCGCGGTG CCTGGCGCGA TCGTGCGCCG CTCGGCCTTC
ATCGCCAAGA ACGTCGTGCT GATGCCGTCT TTCGTCAATC TCGGCGCCTA TGTCGACGAG
GCCACCATGG TCGATACCTG GTCGACAGTC GGCTCCTGCG CCCAGATCGG CAAGCGCGTC
CATATCTCCG GTGGTGTCGG CATTGGCGGC GTGCTGGAGC CGCTGCAGGC CGGCCCCGTG
ATCATCGAGG ATGATTGCTT CATCGGTGCA CGATCAGAGG TTGCGGAGGG CGTCGTCGTC
CGGAAGGGCG CAGTGCTCGC GATGGGCGTC TTCCTGGGCG CCTCGACCAA GGTCATCGAC
CGCGAGACCG GCGAGACTTT CGTCGGCGAG GTGCCGGAAT ATGCCGTCGT GGTACCGGGC
GCGCTGCCGG GTAAGCCGAT GAAGAACGGC CAGATCGGCC CGTCCACCGC CTGCGCCGTC
ATCGTCAAGC GCGTCGACGA GCGCACCCGC TCCAAGACCT CGATCAACGA ACTGCTGCGC
GACTGA
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| Protein sequence | MSLSALESTI NSAFDARDGV STTTKGEIRD AVESALELLD KGEARVAERG TDGTWSVNQW
LKKAVLLSFR LNDMSVIPGG PGQASWWDKV PSKFEGWGEN RFREAGFRAV PGAIVRRSAF
IAKNVVLMPS FVNLGAYVDE ATMVDTWSTV GSCAQIGKRV HISGGVGIGG VLEPLQAGPV
IIEDDCFIGA RSEVAEGVVV RKGAVLAMGV FLGASTKVID RETGETFVGE VPEYAVVVPG
ALPGKPMKNG QIGPSTACAV IVKRVDERTR SKTSINELLR D
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