Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7292 |
Symbol | |
ID | 5148992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7653243 |
End bp | 7655063 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640561956 |
Product | putative poly-beta-hydroxyalkanoate synthase |
Protein accession | YP_001243067 |
Protein GI | 148258482 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.577546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGGCA GCTGTACTCT CCTTCAGTGC CCAACTCCTG GAATCGCAAA AAGATGGAAA CGAATGCCTG AGGTCAACTC GCAGACTGCG ACCGATCCGC TGGATGGATT GTCAGAAACG TTGGATCGCG CGACGACGGC TGCCTTCGCG CAAGTGACTT TCGGGCTTTC TCCGGTGACG GTGGCCCAGG CCTTTTCCGA CTGGGGCCTG CATCTCGCCG TTTCGCCGGG CAAGCAGTTG CAGCTCGGCG CGAAAGCAAT GCGCAAGTGC CTCCGATTGG CTGACTATGC AGCCAGGAGC GCGGCGAAGA ACGACGCTGA GCGCGCGATC GAGCCGCTGC CGCAGGACCG CCGCTTCGCG GACACGGCCT GGGCTACGCC CCCGTTCAAT CTAATCTCGC AAGCCTTTTT GCTGAACCAG CAATGGTGGC ACGCGGCGAC GACTGGCGTC GCGGGCGTCA CCAAGCATCA TGAAGACATG GTGGCGTTCA CCGTGCGGCA ATGGCTCGAC ACGGTGGCGC CCACCAATTT TCTCGCCACC AATCCAGTCC TCCAGCAGCG CATCCTGGAC ACCGGCGGGC GATGCCTGAT CGATGGGGTG CGCAACCTCA TGGACGACAT GGGGCGGATG GTCCGCGGTC AGCCGCCAGC TGGCGCGGAA GCGTTTCGAG TCGGTGAGTC CGTCGCCACG GCCAGTGGCA AGGTGGTCTG CCGCAACAGG CTGATGGAAC TGATCCAGTA TGCGCCGACG ACCGATATGG TGCGGCCGGA GCCGATCCTG ATCGTGCCGG CCTGGATCAT GAAGTACTAT ATTCTCGACC TTTCGCCCGG GAACTCGCTG GTTAACTGGT TGACCGGACA GGGCTTCACT GTCTTCATGA TCTCATGGAG CAATCCGGGC AGCGCAGACC GCGATCTCGA CATGGAGGAC TATCGTCGGC TCGGACCGAT GGCCGCTCTC GACGCCATCT GCGCGATCAC TGGCGCCGCT TCAGTCCATT CAGTGGGCTA CTGCCTGGGT GGGACGCTGC TGTCGATCGT CGCCGCGACG ATGGCGCGCG ATGGGGACGA GCGGCTCGCG AGCGTGACCC TGCTCGCGGC CCAGACCGAA TTCTGCGAAC CGGGCGAACT TGGCCTGTTC ATCGACCAGG GGCAGCTTAA CCTCCTGGAA AGCCTGATGT GGAGTCGAGG GTATTTCGAC AGCAGCCAGA TGGGCGGCGC GTTCCAGATC CTGCGCTCCA ACGATCTCGT CTGGTCGCGC TTGCTCACCA CGTATTTGAT GGGCGAGCGC GAGCCGATGA CCGATCTGAT GGCCTGGAAC GCCGACGGCA CACGCATGCC CTCTGCGATG CACAGCCAGT ATCTGCGCCA GTTGTTTCTC GGGGACGATC TGTCCGAGGG CCGCTACAAG GTCGATGGAC GCACGATCAG TCTCTCCGCC ATGCGCCAGC CGATGTTCGT CGTGGGCACG GAACGCGATC ACGTTGCGCC GTGGCGATCG GTGCACAAGA TCCATCGCCT GACCGGCGCG GCGATCGACT TCGTGCTGAC GAGCGGCGGC CACAATGCCG GCATCGTGTC GGAGCCAGGG CGACCGCGTC GTTCCTATCG ACTGCTCCGC CGCGAGGCGG ACGGGCCGGC GCTCGATCCG GATGAGTGGC TGACCAGGAC CCAACTCTTT GAAGGAAGCT GGTGGCCGGC TTGGAGCGAC TGGCTCAAGC GGCATTCCGG CGAAGCCGCA ACGGCGCCGC CGATGGGCGC GCCCGACAAG AACTATCCGA TCATCGCCGA CGCGCCCGGC CACTATGTGC TGGAGCGTTG A
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Protein sequence | MVGSCTLLQC PTPGIAKRWK RMPEVNSQTA TDPLDGLSET LDRATTAAFA QVTFGLSPVT VAQAFSDWGL HLAVSPGKQL QLGAKAMRKC LRLADYAARS AAKNDAERAI EPLPQDRRFA DTAWATPPFN LISQAFLLNQ QWWHAATTGV AGVTKHHEDM VAFTVRQWLD TVAPTNFLAT NPVLQQRILD TGGRCLIDGV RNLMDDMGRM VRGQPPAGAE AFRVGESVAT ASGKVVCRNR LMELIQYAPT TDMVRPEPIL IVPAWIMKYY ILDLSPGNSL VNWLTGQGFT VFMISWSNPG SADRDLDMED YRRLGPMAAL DAICAITGAA SVHSVGYCLG GTLLSIVAAT MARDGDERLA SVTLLAAQTE FCEPGELGLF IDQGQLNLLE SLMWSRGYFD SSQMGGAFQI LRSNDLVWSR LLTTYLMGER EPMTDLMAWN ADGTRMPSAM HSQYLRQLFL GDDLSEGRYK VDGRTISLSA MRQPMFVVGT ERDHVAPWRS VHKIHRLTGA AIDFVLTSGG HNAGIVSEPG RPRRSYRLLR READGPALDP DEWLTRTQLF EGSWWPAWSD WLKRHSGEAA TAPPMGAPDK NYPIIADAPG HYVLER
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