| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7140 |
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| Symbol | |
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| ID | 5153732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7485093 |
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| End bp | 7486433 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561817 |
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| Product | HlyD family secretion protein |
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| Protein accession | YP_001242928 |
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| Protein GI | 148258343 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.706887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCC AAGTCATCAC AGGCGCCGCG ATCGGACCGG GCAAGACGGT CGGGGTGCGG
CAGTCGATCC GGCTGCACCT GATCGTCGGC ATGGCCGTGG TCGCGGTCGT CGCTGGCGGG
CTCGGCGGCT GGGCCGCGAC CCAGCAGATC TCCGGCGCGC TGATCGCGCC CGGCCAGATC
GTGGTCGAAT CCAACGTCAA GAAGGTGCAG CATCCGACCG GTGGTGTCGT CGGCGAGCTG
CGGGCCCGCG ACGGCGATGT CGTCAAGTCC GGCGATATCG TCGTGCGGCT CGACGACACG
GTGACCAAGG CGAGTCTTGC CATCGTCACC AAGAACCTCG ATGCGCTGCT GGCGCGCGCC
GCCCGGCTGG AGGCCGAGCA GCGTGGCTGG GCCAAGATCC TGTTCCCGCA GCAGCTGCTG
CAGCGGCTGA GCGACCCCGA CGTCAGCGGC CTGCTGGCGT CGGAGACCAA GCTGTTCGAG
GTGCGCGTCA ATGGCCGCAT CGGCCAGAAG GCGCAGCTGC GCGAACGCGT CGCCCAGCTC
ACCGAGGAGA TCGAGGGCCT CTCGGCGCAG GTCAGCGCCA AGGAGCAGGA GATCGCGCTG
GTGCAGAAGG AACTCGAGGG CGTGCGCCAG CTCTATGAGC AGCATCTGGT GCAGCTGTCG
CGCCTGACCA CATTGGAGCG CGACACCGCC CGCCTCAACG GCGAGCGCGC GCAATTCATC
GCCGCCCGGG CCCAGGCCAA GGGCAAGATC AGCGAGACCG AGCTGCAGAT CATCCAGGTC
GACAAGGACA TGGTCAGCGA GGTGTCGAAG GATCTGCGCG AGACCACCGA CAAGATCGGC
GAGTTCGTCG AGCGCAAGGT CACCGCCGAG GACCAGCTGC GCCGGGTCGA CATCCGCGCG
CCGCAGGACG GCATGGTGCT GCAATCCTCC GTCCACACCG TCGGCGGCGT CATCACCGCC
GGCGACACGA TCATGCTGAT CGTGCCGCAG GCCGACGACC TGCAGGTTGA GGCCAAGGTC
AATCCGCAGG ACATCGACAA GCTGCAGGTC GGCCAGAAGA CGCTGCTGCG GCTGTCCGCT
TTCAACCAGC GCACAACGCC GGAGCTGAAC GGCGTGGTCA GCCGCGTCTC GCCCGACGTC
ACCACCGACC AGCGCACCGG CCAGAGCTAT TACACCATCC GCGTGTCGAT GCCGCCGCAG
GAGATCGCCC GGCTCGGCGA CGTCAAGCTG ATCCCGGGCA TGCCGGTGGA GGCCTTCGTC
CAGACCGGCG ATCGCACCGT TCTGTCCTAT CTGATGAAGC CGCTGCACGA CCAGCTGATG
CGGGCGTTCC GGGAGAAGTG A
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| Protein sequence | MSSQVITGAA IGPGKTVGVR QSIRLHLIVG MAVVAVVAGG LGGWAATQQI SGALIAPGQI
VVESNVKKVQ HPTGGVVGEL RARDGDVVKS GDIVVRLDDT VTKASLAIVT KNLDALLARA
ARLEAEQRGW AKILFPQQLL QRLSDPDVSG LLASETKLFE VRVNGRIGQK AQLRERVAQL
TEEIEGLSAQ VSAKEQEIAL VQKELEGVRQ LYEQHLVQLS RLTTLERDTA RLNGERAQFI
AARAQAKGKI SETELQIIQV DKDMVSEVSK DLRETTDKIG EFVERKVTAE DQLRRVDIRA
PQDGMVLQSS VHTVGGVITA GDTIMLIVPQ ADDLQVEAKV NPQDIDKLQV GQKTLLRLSA
FNQRTTPELN GVVSRVSPDV TTDQRTGQSY YTIRVSMPPQ EIARLGDVKL IPGMPVEAFV
QTGDRTVLSY LMKPLHDQLM RAFREK
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