| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7096 |
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| Symbol | |
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| ID | 5152943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7442179 |
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| End bp | 7443498 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561774 |
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| Product | TRAP dicarboxylate family transporter DctM subunit |
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| Protein accession | YP_001242885 |
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| Protein GI | 148258300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0936946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG ATGCGGTCGC AATCATCGGC TTCGTCGCGC TGTTTGCCCT GATGCTGTTG
CGCGTGCCCG TCGGCATGGC GATGGGGCTC GTCGGCGTCT CCGGCTTCGC CTACCTCGTC
AACGGCACGG CGGCTCTGAA GCTGGTCGGC CAGACCTCGA TGCGCACGGT CACGGACTAC
ACCTTCGGCG TGATCCCGAT GTTCCTGCTG ATGGGAACGT TCGTGTCCAA CTCCGGCATG
AGCCGCGAGC TGTTTCGCGC TGCCAACGGC TTTGTCGGCC ATTTGCGGGG CGGCCTCGGC
ATCGCCACGG TGGCCGCCTG CGGCGGCTTT GCCGCGATCT GCGGCTCGTC GGTGGCGACC
GCCGCGACCT TCTCGGCGGT GGCCTATCCG GAGATGCGCC GCTTCGGCTA TCCGCAATCC
TTCGCTACCG GCGTCATCGC CGCCGGCGGC ACGTTAGGGG CGATGCTGCC GCCCTCCACG
GTGCTCGCGG TGTATGGCAT CATCACCGAG CAGGACATCG GCAAGCTGTT CATTGCCGGT
ATCATCCCGG GCCTCCTGGC GATGACCATG TACATGGTCA CCATCACGGT GATCGGGCGC
GTCAGGCCGG ACTTCCTTCC CAAGGGTGAG GCGCTGCCGT GGCGCGAGCG GATCAAGGGG
CTGAAGGGTA TCTGGGCGCC AGTGCTGCTG TTCCTGTTCG TGATCGGCGG CCTCTACGGT
CTGCCGTTCC TGCCGCGCTT CACGCCGACG GAAGCCGGCG GCGTCGGTGC CACCGGCGCC
TTCCTGATCG GCCTGTTCAC CGGTCGGCTC GACAAGGACA AGATCCTGGC CTCGCTGCTG
CAGGCGACAC GCACGGCGGC GGCCGTATTC ACGGTGCTGA TCGGCGCGCT GATCTTCGGC
TACTTCCTCA CGGTGACGCA GACGCCGCAG AAGGTGACGG AGTTCCTCAC CGGCCTCGGC
CTCGGGCCCT ACGGCGTGCT GGCGCTGATC ATGGTGATGT ATCTGGTGCT CGGCTGCCTG
ATGGACGCCA TGGCGATGAT CATCCTGACT GTGCCGATCA TCTTTCCGGT GATCTCGCAT
CTCGGATTCG ATCCGATCTG GTTCGGCGTC ATCATCGTGA TGACCGTCGA GCTCGGCCTG
ATCCACCCGC CGGTCGGCAT GAACGTATTC GTGATCAAGA GCGTGGTGAA GGATGTCTCG
TTCTCCACCA TCTTCAAGGG CGTGCTGCCC TTCGTCGCGA CCGATCTGAT CCGGCTGGTG
ATCCTGATCG CCTTCCCGCT GCTCGCCACC TGGCTGCCGC AACAGATGAT GAACCGATGA
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| Protein sequence | MSTDAVAIIG FVALFALMLL RVPVGMAMGL VGVSGFAYLV NGTAALKLVG QTSMRTVTDY
TFGVIPMFLL MGTFVSNSGM SRELFRAANG FVGHLRGGLG IATVAACGGF AAICGSSVAT
AATFSAVAYP EMRRFGYPQS FATGVIAAGG TLGAMLPPST VLAVYGIITE QDIGKLFIAG
IIPGLLAMTM YMVTITVIGR VRPDFLPKGE ALPWRERIKG LKGIWAPVLL FLFVIGGLYG
LPFLPRFTPT EAGGVGATGA FLIGLFTGRL DKDKILASLL QATRTAAAVF TVLIGALIFG
YFLTVTQTPQ KVTEFLTGLG LGPYGVLALI MVMYLVLGCL MDAMAMIILT VPIIFPVISH
LGFDPIWFGV IIVMTVELGL IHPPVGMNVF VIKSVVKDVS FSTIFKGVLP FVATDLIRLV
ILIAFPLLAT WLPQQMMNR
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