| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7055 |
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| Symbol | |
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| ID | 5152255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7391886 |
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| End bp | 7393730 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640561733 |
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| Product | oligopeptide ABC transporter periplasmic substrate-binding protein |
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| Protein accession | YP_001242844 |
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| Protein GI | 148258259 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0391894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCCGG CGCTCGGCAC CGCCGCCAGC CTTGCCCCTC TCGACGCCGC GCAGGCGCAG
GCCGGGGAGC AACTGGTCTG GCGCCACGGC CTGTCGCTGT TCGGCGAGGT GAAGTACCCG
GCCGACTTCA AGCGCTTCGA CTACGTCAAT CCCGACGCGC CCAAGGGCGG CACGGCCCGG
ATGATCTCGC TCGGGACGTT CGACAATTTC AACATCGTCG TGATGTATGT GAAGGGCAAC
ATCGCCGCGG CCGCGATGCT CCCCTACGAG ACGCTGATGA CGCGGTCGCA GGACGAGATC
TCGACCGAAT ACGGCCTGCT CGCCGAGGCG GCGTCCTACC CCGACGATTA TTCGTGGGTG
ATCTATCGGC TGCGCCCGGA GGCGCGCTGG CATGACGGCA AGCCGGTCAC GCCGGAGGAT
GTCATCTTCT CGCTCGACGT GTTGAAGAAG AACAGCCCAT TCTACTCGTC CTACTACCGT
CACGTCATCA AGACCGAGAA GACCGGCGAC CGCGAGGTGA AGTTCACCTT CGACGGTCCG
GGCAATCGCG AGCTGCCGCA CATCGTCGGC GAGATGATCG TGCTGCCGAA GCATTATTGG
GAAGGCACCG ATGCGCAGGG GCGCAAGCGC GACGTCACCG CCACGACCCT GGAGCCGCCG
CTCGGGTCCA GCCCCTACCG GATCAAGGAT TTCGTGCCGG GACGCTCGAT CAAGGTCGAG
CGCGTCAAGG ACTATTGGGG CGCCAATTTG CCGGTCCGGA TCGGCCAGAA CAATTTCGAC
GAGCTGCAAT ACGAGTACTT CCGTGACAAC CAGGTCGCCC TCGAAGCGTT CAAGGCCGAT
CAGGCCGACT GGATCAACGA GAACTCGGCC AAGCAGTGGG CCACGGCCTA CGAATTCCCG
GCGATTGTCG ACAAGCGCGC GGTCAAGGAG GAATTCCCGG TCCGCGATTC CGGCCGCATG
CAGGGCTTCG TGTTCAACCT GCGCCGCCCG CAATTCCAGG ATGCCCGGCT GCGCCGCGCC
TTCAACTATG CGTTCGATTT CGAGGAGATG AACAAGCAGC TGTTCTTCGG CCAGTACAAG
CGGATCAACA GCTATTTCGA AGGCACCGAT CTTGCCTGCT CGGGCCTGCC GCAGGGCCAG
GAGCTCGAGC TGCTGGAGGC GCTGCGCGAC AAGGTGCCGC CGGAGGTGTT CACCACGCCC
TACCAGAACC CGGTCGGCGG CAATCCGGAG AACGTGCGCG GCAATCTGCG CGAGGCCACG
AAGCTCCTGA AGGACGCCGG CTACGAGATC AAGGACCGCA AGCTGGTCGA TCCTGCCGGC
AAGCCGGTCG CGATCGAGAT GCTGGTGCAG GATCCCTCGT CCGAGCGCAT CGTGCTGTTC
TACAAGCCGT CGCTGGAGCG GCTCGGCGTC ACCGTGACGG TGCGCCAGGT CGACAACGTC
CAGTATGAGC AAAGGGTTCG CACCTTTGAT TACGACATTA TCACCGACAC CTGGGGCCAG
TCGCTGTCGC CCGGTAACGA GCAGCGCGAT TTCTGGGGTT CCAAGGCGGC CGACGAGCAG
GGCTCGAAGA ACGCGGCCGG CATCAAGAAT CCGGCCATCG ACCAACTGAT CGAGAAGATC
ATCTTCGCCA AGGACCGTGC CAGCCTGGAA GCGGCGACGC ATGCGCTCGA CCGCGTGCTG
CTGTGGAATT TCTACGTCGT GCCGCAATTC ACCTATCCGT TCGCGCGCAG CGCCCGCTGG
GACCGCTTCA GCCATTTCGA GCCGTTCCCC AAATATGCCA GCACCGGCTG GCCGACGCTG
TGGTGGTACG ACGCCGACAA GGCTGCCAAG GTGAAGCGCT CTTGA
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| Protein sequence | MVPALGTAAS LAPLDAAQAQ AGEQLVWRHG LSLFGEVKYP ADFKRFDYVN PDAPKGGTAR
MISLGTFDNF NIVVMYVKGN IAAAAMLPYE TLMTRSQDEI STEYGLLAEA ASYPDDYSWV
IYRLRPEARW HDGKPVTPED VIFSLDVLKK NSPFYSSYYR HVIKTEKTGD REVKFTFDGP
GNRELPHIVG EMIVLPKHYW EGTDAQGRKR DVTATTLEPP LGSSPYRIKD FVPGRSIKVE
RVKDYWGANL PVRIGQNNFD ELQYEYFRDN QVALEAFKAD QADWINENSA KQWATAYEFP
AIVDKRAVKE EFPVRDSGRM QGFVFNLRRP QFQDARLRRA FNYAFDFEEM NKQLFFGQYK
RINSYFEGTD LACSGLPQGQ ELELLEALRD KVPPEVFTTP YQNPVGGNPE NVRGNLREAT
KLLKDAGYEI KDRKLVDPAG KPVAIEMLVQ DPSSERIVLF YKPSLERLGV TVTVRQVDNV
QYEQRVRTFD YDIITDTWGQ SLSPGNEQRD FWGSKAADEQ GSKNAAGIKN PAIDQLIEKI
IFAKDRASLE AATHALDRVL LWNFYVVPQF TYPFARSARW DRFSHFEPFP KYASTGWPTL
WWYDADKAAK VKRS
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