| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7054 |
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| Symbol | |
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| ID | 5151901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7390012 |
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| End bp | 7391856 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640561732 |
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| Product | oligopeptide ABC transporter periplasmic substrate-binding protein |
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| Protein accession | YP_001242843 |
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| Protein GI | 148258258 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.334122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGGGC TTGGCCTCGG CGCGCTCGGC GTTCCCCTGC TGAAGCCGGC GATGGCCGCG
GAGTTCGGCG CGGACTCGCA CGGCATGTCG GCGTTCGGCG ACCTCAAATA TCCGGCCGAC
TTCCCTCATT TCGATTACGT CAATCCGGAC GCGCCGAAGG GCGGGATGTT CTCGCTGATC
CCCTCGGTGC GCGCCTACAA CCAGTCCTAT CAGACGTTCA ATTCCTTCAA TGCCTACGTC
CTCAAGGGTG AGGGCGCGCA GGGCATGGAC ATGACGTTTG CCACCCTGAT GGTGCGCGCG
ACCGACGAAC CGGATGCGGT GTATGGGCTG GTCGCGAAGT CCGTGGCGAT CTCGCCGGAC
AAGCTGACCT ATCGCTTCAC CTTGCGTCCC GAGGCGCGCT TCCACGACGG TTCGAAGATC
ACGGCGCAGG ACGTCGTCTG GTCCTTGAAC ACCTTGAAGG AGAAGGGCCA TCCGCTGATC
GTCGTGCAGC TGCGCGACTT CGTGAAGGCC GAGGCACTCG ATGACGCGAC CGTCGTGCTC
AGCTTCGTCG AGAAGCGCGC CCGCGACGTG CCGCTCTACG TCGTCACCCT GCCGATCTTC
TCCAAGGCCT GGTATGCGAA CCGTGCCTTC GACGAGAATC CGCTGGACGT GCCGCTCGGC
TCGGGGCCGT ACAAGGTCGG CAAATACGAG ATCAACCGCT ACGTCGAGTT CGAGCGCGTC
AAGGATTGGT GGGCCGCCGA CCTGCCGGTC AGCCGCGGCC TCTACAATTT CGACAGTGTG
CGCTACGAAT TCTACCGTGA TCGCGACGTC GCCTTCGAGG GCTTCACCGC CAAGAGCTAT
CTGTTTCGCG AGGAGTTCAC CTCGCGCATC TGGGCGACGC GCTACGATTT CCCGGCGATC
AAGGACGGCC GCGTCAAGCG CGAGCTGCTG CCGGACGAGA CGCCATCGGG CGGCCAGGGC
TGGTTCGTCA ACACCCGCCG CGACAAGTTC AAGGACCCCC GTGTCCGCCA GGCGCTAACC
TACGCCTTCG ATTTCGAATG GACCAACAAG ACCATCATGT ACGGCGCCTA TGCGCGCACG
GTGTCGCCGT TCCAGAACTC CGACATGGTC GCCGTCGGGC CGCCCTCGCC GGAGGAGCTG
AAGCTGCTGG AGCCGTTCCG CGGCCAGGTG CCTGACGACG TCTTCGGCGA ACCGTTCGTG
CCGCCGGTCT CGGATGGCTC GGGCCAGGAC CGCGCGATGC TCCGCAAGGC CACGCAACTG
CTGCAGCAGG CGGGTCTTCC GGTCAAGGAC GGCAAGCGGC TGCTGCCATC GGGCGAGGTC
TTCAGCATCG AGTTCCTGAT CGACGAGGTG TCGTTCAAGC CGCATCACGG CACCCTGATC
AAGAATCTGC AGACGCTCGG CATCGATGCC GACCTGCGCA TCGTCGATGC GGTGCAATAC
CGCGCGCGGG TCGAGGATTT CGATTTCGAC ATCACGGTGC AGCGGCTGTC GATGTCGCCG
ACCCCCGGCG ACAGCCTGAG GCCGTACTTC ACCTCCGATG CGGCCAAGAC CAAGGGCTCG
TACAATCTCG CCGGCATCAG CAATCCCGCG ATCGATGCGC TGGTCGCCAA GGCGATCGGC
GCCGACACCC GTGGTGAACT GACGCTCGCC TGCCGCGCGC TGGATCGCGT GTTCCGCGCC
GGCCATTACT GGATACCGCA ATGGTATCGC CAGACCCATC CGATCGCCTA TTGGGATCAG
TTCGGCCACC CGCCGAAGCC GCCGAAATAC GCATCCGGCG TGGGCGCCCC CGATATCTGG
TGGTACGATG CCGCCAAGGC CGCAAAGCTG GAGCAAGCGA AGTAG
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| Protein sequence | MLGLGLGALG VPLLKPAMAA EFGADSHGMS AFGDLKYPAD FPHFDYVNPD APKGGMFSLI
PSVRAYNQSY QTFNSFNAYV LKGEGAQGMD MTFATLMVRA TDEPDAVYGL VAKSVAISPD
KLTYRFTLRP EARFHDGSKI TAQDVVWSLN TLKEKGHPLI VVQLRDFVKA EALDDATVVL
SFVEKRARDV PLYVVTLPIF SKAWYANRAF DENPLDVPLG SGPYKVGKYE INRYVEFERV
KDWWAADLPV SRGLYNFDSV RYEFYRDRDV AFEGFTAKSY LFREEFTSRI WATRYDFPAI
KDGRVKRELL PDETPSGGQG WFVNTRRDKF KDPRVRQALT YAFDFEWTNK TIMYGAYART
VSPFQNSDMV AVGPPSPEEL KLLEPFRGQV PDDVFGEPFV PPVSDGSGQD RAMLRKATQL
LQQAGLPVKD GKRLLPSGEV FSIEFLIDEV SFKPHHGTLI KNLQTLGIDA DLRIVDAVQY
RARVEDFDFD ITVQRLSMSP TPGDSLRPYF TSDAAKTKGS YNLAGISNPA IDALVAKAIG
ADTRGELTLA CRALDRVFRA GHYWIPQWYR QTHPIAYWDQ FGHPPKPPKY ASGVGAPDIW
WYDAAKAAKL EQAK
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