| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7031 |
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| Symbol | |
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| ID | 5151344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 7361337 |
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| End bp | 7362830 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561709 |
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| Product | putative pilus assembly protein cpaC |
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| Protein accession | YP_001242820 |
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| Protein GI | 148258235 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.157408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.721299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGA GGACCACCAC GATGACATGC AGCGAAAATC AGCGAAAACT GCGGACCGCG
ATGGTTCGCG CGCTGTCGTT TTCGGCCGCC GCTGCGCTGA CCTTGAATCC GGCGCTGGCG
CCGGTGATCG CGGCGGATTA CCACCCGGCG GTCACGGCAG CCGCGGCCGA CGGCCAGATC
AATGCGCGCT TCCTGGCGCT CGGCGTCGGC AAATCCGTGG TCATCGATCT GCCCCGCGAC
ATCAAGGATG TGCTCGTCGC CGATCCGAAG ATCGCCAATG CCGTGGTCCG CTCGTCGCAG
CGCGCTTACA TCATCGGCGC AACCGTCGGC CAGACCAACA TCGTCTTCTT CGATGCCCAG
GGACAGCAGA TCGCGGCCTA TGACATTGCG GTCAAGCGCG ATCTCAACGG GGCGCGTGCC
GCGCTGAAGC AGCTGCTGCC CAATTCGGAC ATCCAGATCG AGGGCCTCGG CGACAGCATC
GTCCTGAGCG GCTCGGCCGC GAGCCAGATC GAGGCTCAGC AGGCCGGCGA GCTCGCGGCG
CGACTCGCAG GCGGCGCCGA CAAGGTCGTC AACTCGATCA CGGTCAGAGG CCGCGATCAG
GTCATGCTCA AGGTGACGGT TGCCGAGGTC CAGCGCTCCG TCGTCAAGCA GCTCGGCATC
GATCTGTCGG GCCAGCTCAA TTACGGCACC GCGGTGGTCA AATTCGCCAA CTCCAACCCG
TTCACCGCCT ATGGCAGCAA CCTGGTCTCC AACAATGCGA TCAACGCGTC GTTCGGGTCT
TCGGTTCAGG CGACGCTGCG GGCCATGGAG AACGCCGGCG TGATCCGCAC GCTGGCCGAG
CCGAATCTGA CCGCGATCTC GGGCGAGTCG GCTACCTTCA TCGCCGGCGG CGAGTTCCCG
GTTCCGGCCG GCTATTCCTG CGATCCGACG ACCCATGTCT GTACGACGCA GATCAGCTTC
AAGAAGTTCG GCATCTCCCT CAACTTCACA CCGGTCGTGT TGGCCGAGGG CCGGATTTCG
CTACGGGTGA TGACGGAGGT GTCCGAACTC TCCAACGAGA ACTCCATCAC CCTGTCGCAG
GCGGTGACCT CATCGACCGT GAACTCGCTC ACCGTTCCCT CGATCAAGAC CCGCCGCGCC
GAGACGACGC TGGAGATCCC CTCCGGCGGC GCCATGGCGA TGGCCGGCCT GATCCAGCAG
CAGACCAAGC AGGCGATCAG CGGCATGCCG GGCCTGATGC AGTTGCCGGT TCTCGGCACG
CTGTTCCGCA GCCGCGACTA CGTCAACAAC CAGACCGAAC TGATGGTGCT GGTGACGCCG
TTCGTCGTGC GCGCCGTCGC GCAGAAGGAT CTCTCACGTC CCGACGACGG CTTCGCCGCA
GCATCCGATC GGCAAGCCGA TCTTCTGGGC AGCATCAATC GCATCTATGG CGTGCCCGGC
CGGGTCGAGC CCGGACGCAG CTATCGCGGC ACCTACGGCT TCATCACGGA CTGA
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| Protein sequence | MTERTTTMTC SENQRKLRTA MVRALSFSAA AALTLNPALA PVIAADYHPA VTAAAADGQI
NARFLALGVG KSVVIDLPRD IKDVLVADPK IANAVVRSSQ RAYIIGATVG QTNIVFFDAQ
GQQIAAYDIA VKRDLNGARA ALKQLLPNSD IQIEGLGDSI VLSGSAASQI EAQQAGELAA
RLAGGADKVV NSITVRGRDQ VMLKVTVAEV QRSVVKQLGI DLSGQLNYGT AVVKFANSNP
FTAYGSNLVS NNAINASFGS SVQATLRAME NAGVIRTLAE PNLTAISGES ATFIAGGEFP
VPAGYSCDPT THVCTTQISF KKFGISLNFT PVVLAEGRIS LRVMTEVSEL SNENSITLSQ
AVTSSTVNSL TVPSIKTRRA ETTLEIPSGG AMAMAGLIQQ QTKQAISGMP GLMQLPVLGT
LFRSRDYVNN QTELMVLVTP FVVRAVAQKD LSRPDDGFAA ASDRQADLLG SINRIYGVPG
RVEPGRSYRG TYGFITD
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