Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_7017 |
Symbol | |
ID | 5151003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 7350098 |
End bp | 7351660 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640561697 |
Product | branched chain amino acid ABC transporter permease |
Protein accession | YP_001242808 |
Protein GI | 148258223 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.470774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTGATCGTCG CGGCCGTTCC GGCCTTCGCC GCCAGCTTCG AAGAGTCCGT CGCCAAATTC GCCAATGACG ATTTCTCCGA CACCGATGAT GCGGTGGGCG AGATCGCGGT GTCGGGCAAT CCGCTGGCCT ATCCGATAAT CAGCGCGCTG CAGGACGAGC GGCTGATGTT CGATGCCGAG ACCAAGAAGG TCTATGTCAA GCAGGCCGAC GGCAAGATCA TCGATGCGGC CACCGGCGCG GCCGTCGACA AGCTGCCCGA CAATGCCGCG GCGGTGAGCC TCAACAATCG CCTGCGCCGC AGTGTCGACG CCGCGCTGGG CGGCCTGACC CTGCTGTCGC CGGACGTGAT CACGCGGCTG TCGGCGGCGA AATCCGTGTT CAAGTCGCAT GACGAGGCGA CGCTGCCGAC GGTGGACTCG GCGCTCGCCA AGGAAACCAA CCGCAGCGTC AAACAGGCGC TGACCGAGGC GCGCGCCGCC ATTCTCCTGT TCAAGTCCGA TGCCAGCGAG GTCGACAAGC TCGAGGCCGT CGCGACCATC AGGGCGCGCA GCGATCAGGA AGCGCTGGCG CTGCTGACCG AGATCAGCGG CGGCGATCAG CCGGCGAGCG TTGCCAAGGC CGCGGCCGGC GCCATCGCCG CGATCCAGAG TTCGCTCGCG ATCTGGTCCG GCGTGCAGAA CGCCTGGTAC GGTCTGTCGC TCGGCTCGGT GCTGCTGCTG GCCGCCATCG GCCTCGCCAT CACCTTCGGC GTCATGGGCG TCATCAACAT GGCCCATGGC GAGATGGTGA TGCTCGGCGC CTACACCACC TTCGTCGTGC AGGAGGTGAT CCGCACGCGC TACCCGGCGC TGTTCGACTA TTCGCTGCTG ATCGCGGCCC CGCTCGCTTT CTTGGTGGCC GGGGCAATCG GCGTGCTGAT CGAACGCACC ATCATCCGCT TCCTCTATGG TCGTCCGCTG GAGACGCTGC TGGCCACCTG GGGCCTGTCG CTGATCCTGC AGCAGGCGGT GCGTTCTGCC TTCGGCCCCA CCAACCGCGA GGTCGGCAAT CCCTCCTGGA TGAGCGGCGC GTTCGAGCTC GGCCAGATCA CCATCACCTA TAACCGGCTC TGGATCCTCT GCTTCACCAT GGCCGTCTTC GCGATCCTGC TGGCGATGCT GCGCTACACC GCGCTTGGGC TGGAGATGCG CGCGGTGACG CAGAACCGCC GCATGGCCGC GTCGATGGGC ATCGCGACGT CGCGGGTCGA TGCGCTCACC TTCGGCCTCG GCTCCGGCAT TGCCGGCATC GCCGGCGTGG CGCTGTCGCA GATCGACAAT GTCAGCCCCA ACCTCGGCCA GAGCTACATC ATCGACTCCT TCATGGTCGT GGTGTTCGGC GGCGTCGGCA ATCTCTGGGG CACTTTGGTC GGCGCCTTCA CACTCGGCAT CGCCAACAAG TTCCTGGAGC CGGTCGCCGG CGCCGTGCTC GGCAAGATCG CTATCCTGGT GCTGATCATC CTGTTCATTC AGAAGCGCCC GCGCGGCCTG TTCGCGCTCA AGGGCCGGGC GGTGGAAGCA TGA
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Protein sequence | MIVAAVPAFA ASFEESVAKF ANDDFSDTDD AVGEIAVSGN PLAYPIISAL QDERLMFDAE TKKVYVKQAD GKIIDAATGA AVDKLPDNAA AVSLNNRLRR SVDAALGGLT LLSPDVITRL SAAKSVFKSH DEATLPTVDS ALAKETNRSV KQALTEARAA ILLFKSDASE VDKLEAVATI RARSDQEALA LLTEISGGDQ PASVAKAAAG AIAAIQSSLA IWSGVQNAWY GLSLGSVLLL AAIGLAITFG VMGVINMAHG EMVMLGAYTT FVVQEVIRTR YPALFDYSLL IAAPLAFLVA GAIGVLIERT IIRFLYGRPL ETLLATWGLS LILQQAVRSA FGPTNREVGN PSWMSGAFEL GQITITYNRL WILCFTMAVF AILLAMLRYT ALGLEMRAVT QNRRMAASMG IATSRVDALT FGLGSGIAGI AGVALSQIDN VSPNLGQSYI IDSFMVVVFG GVGNLWGTLV GAFTLGIANK FLEPVAGAVL GKIAILVLII LFIQKRPRGL FALKGRAVEA
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