Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6968 |
Symbol | |
ID | 5150332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 7305241 |
End bp | 7306617 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640561650 |
Product | PST family polysaccharide export protein |
Protein accession | YP_001242761 |
Protein GI | 148258176 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.756164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGTGA TGGATGCCCG CAACGACACC ACATCGACAG GCCTCGCAGC CCGGCTGAGG GCGCGCGTCG CGGCGCTCGC CGGCGGCGGT GAAGCATCGC TCACGCAGCG GCTCGCGGCG CTGATCTTCC TCATCCGCGT GCTGAGCGCC GGCCTTGCCT ATCTCAGCCA GATCCTGCTC GCGCGCTGGA TGGGCGGCTC GGATTACGGC ATCTATGTCT ATGTCTGGAC CTGGGTGCTG CTGCTCGGCA GCATGCTCGA TTTCGGCATC GCCTCGTCGG CGCAGAAGAT CATCCCCGAC TATCGCACGT CCGGCCAGCA CGCGCTGCTG CGCGGCTTCC TGTCGGGCGG CCGCTGGCTG ACCCTGGCAA CCTCCGGCAT CGCCGCTTTG CTGCTCGCCG GACTGATCGC GCTGCTGTCG CCGTGGATCG AGGAGAGCGA GCGCCTGCCG CTCTATATCG GTTGCCTGAC CTTGCCCGCT TTCGTGGTCG CCAACACCCA GGACGGCATC GCGCGCTCGC ATGATTGGAT GACGCTCGGG CTGATGCCGC AATTCATCAT CCGCCAGGGC CTGATCATCG GCTTCACCGC AGGCGCCCTG GTGCTCGGCT TTCAGCTCGG CGCCAGCGCC GCCATGGCCG CCAGCGCCGC CGCGGTGTGG GTCGCGATGC TCGGCCAGAT GCTGGTGCTG AACCGGCGGC TCGAGCGCCA CGTCGAGGTC GGGCCGAAAC AATATGATCT GCGCGGCTGG CTCGCAGTGT CGCTGCCGAT CCTGCTGGTC GAGAGCTTCT ATCTGCTGTT GTCCTACACC GATGTCCTGG TGCTGCAGCA GTTCCGCTCC TCCGAAGAGG TCGGTGTCTA TTTCGCGGTG GTGAAGACGC TCGCGCTTGT GTCGTTCATC CACTACGCGA TGTCGGCGAC CACGGCGCAT CGCTTCGCGG AATATCACGC GCTCGGCGAC AAGGCACGGC TGTCGGCCTA TGTCGCGCAT GCGATCCAAT GGACGTTCTG GCCGTCGCTC GCGGCGACCC TGGTCCTGCT TGCGCTCGGC AAGCCGCTGC TGTGGCTGTT CGGCGCGCAG TTCACTGCGG GTTACGACAT CATGTTCATC GCGGCCATCG GCCTTGTCGT ACGCGCCGCG ATCGGCCCGG TCGAGCGCCT CTTGAACATG CTGGGCCAGC AGCGCGCCTG CGCCTCCGCC TATGCGGCCG CCTTCGTCAT GAACCTCGTG CTGTGCATCG TCCTGGTACC CCGCTTCGGC GGCCACGGCG CCGCGGCGGC GACCTCGTTG TCTCTGGTGT TCGAAACGGT GCTGTTGTTC CGCATCGTCA AGCGACGGCT CGGCCTGCAC GTTCTCGCCT TCGGCAAGGC GTCCTGA
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Protein sequence | MAVMDARNDT TSTGLAARLR ARVAALAGGG EASLTQRLAA LIFLIRVLSA GLAYLSQILL ARWMGGSDYG IYVYVWTWVL LLGSMLDFGI ASSAQKIIPD YRTSGQHALL RGFLSGGRWL TLATSGIAAL LLAGLIALLS PWIEESERLP LYIGCLTLPA FVVANTQDGI ARSHDWMTLG LMPQFIIRQG LIIGFTAGAL VLGFQLGASA AMAASAAAVW VAMLGQMLVL NRRLERHVEV GPKQYDLRGW LAVSLPILLV ESFYLLLSYT DVLVLQQFRS SEEVGVYFAV VKTLALVSFI HYAMSATTAH RFAEYHALGD KARLSAYVAH AIQWTFWPSL AATLVLLALG KPLLWLFGAQ FTAGYDIMFI AAIGLVVRAA IGPVERLLNM LGQQRACASA YAAAFVMNLV LCIVLVPRFG GHGAAAATSL SLVFETVLLF RIVKRRLGLH VLAFGKAS
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