Gene BBta_6886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6886 
Symbol 
ID5151231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7213884 
End bp7214603 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content71% 
IMG OID640561568 
ProductTetR family transcriptional regulator 
Protein accessionYP_001242679 
Protein GI148258094 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0975429 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0518769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC GCAAGGAAGA GCGCCGCGCC GAGCGCGGCT ATCATCACGG CAACCTCAAG 
GAGGCGCTGC TGCAGGCGGC GCTCGACCTG ATTGCGCAAA AGGGCGCCGC CGGCTTCACC
TTCGCCGATG CCGCCCGCAT GGCCGGCGTC AGCCCGGCCG CGCCATACCG TCACTTCCGC
GACCGTGACG AACTGCTGTC CAGCATCGCC CAGCGCGGCT TCGAGCAGTT CGAAGCCCAA
CTCGCGGCGG CCTGGGACGA TGGTCGCCCG GATACGGTCA CCGCGTTCGA GCGGGTCGGC
AAGGCCTATC TCGCCTTCGC CCGGACCGAG CCCGCATTCT ACTCGGCGAT GTTCGAATCC
GGCGTGGCGG CGGACTCAAC GGCCGGGCTG CTGGCGGCCG GCGAGCGTGC ATTCGGCGTC
ATTCGCGCTG CCGCCGAGCG GCTCGCGGCG CTGGCGCCGC CAAATGTGCC GCGGCCGCCG
GCGCTGATGA TGGCGCTGCA CATCTGGTCG ATGTCGCATG GCGTCGCCTC GCTGTTTGCG
CGCGGTGATG CGGCCCGGCG CAAGCTGCCG ATGTCGCCGG AAGAGCTGCT GGAGGCCGAG
GTGCTGATCT ATCTGCGTGG GCTCGGCTTC ACCACCGACC GCCGGCCGGC CTCCGCAGCC
GAGCCGCCGC CGCTGCCGGA CGACGACAAG CCGGCCGGGC CGTGGGGCCG GTCCAAATAA
 
Protein sequence
MSWRKEERRA ERGYHHGNLK EALLQAALDL IAQKGAAGFT FADAARMAGV SPAAPYRHFR 
DRDELLSSIA QRGFEQFEAQ LAAAWDDGRP DTVTAFERVG KAYLAFARTE PAFYSAMFES
GVAADSTAGL LAAGERAFGV IRAAAERLAA LAPPNVPRPP ALMMALHIWS MSHGVASLFA
RGDAARRKLP MSPEELLEAE VLIYLRGLGF TTDRRPASAA EPPPLPDDDK PAGPWGRSK